Gene omics information

Query gene ID At4g08040
Gene name ACS11
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g08040826317ACS11encodes an aminotransferase that belongs to ACC synthase gene family structurallyS.X.H.G.
0.9797.6At1g20520838640unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8793.5At1g76210843954unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8290.9At4g37770829933ACS8Encodes an auxin inducible ACC synthase.S.X.H.G.
0.7586.9At3g09870820145auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:endomembrane system;POS.X.H.G.
0.7184.2At4g38420829999sks9 (SKU5 Similar 9)F:oxidoreductase activity, copper ion binding;P:unknown;C:plant-type cell wall;FBPMOAS.X.H.G.
0.6579.6At1g30135839893JAZ8 (JASMONATE-ZIM-DOMAIN PROTEIN 8)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.6579.6At2g34600818025JAZ7 (JASMONATE-ZIM-DOMAIN PROTEIN 7)F:molecular_function unknown;P:response to jasmonic acid stimulus, response to chitin;C:cellular_component unknown;PS.X.H.G.
0.6378.1At2g201422745551transmembrane receptorF:transmembrane receptor activity;P:signal transduction, innate immune response;C:intrinsic to membrane;PS.X.H.G.
0.6176.7At1g33760840267AP2 domain-containing transcription factor, putativeencodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
428.1100.0E-MEXP-807-raw-cel-1173273088
389.9100.0E-MEXP-807-raw-cel-1173273170
378.6100.0E-MEXP-807-raw-cel-1173273116
341.8100.0E-MEXP-807-raw-cel-1173273196
249.8100.0E-MEXP-807-raw-cel-1173273223
216.7100.0GSM226552Slice10JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
206.3100.0E-MEXP-807-raw-cel-1173273060
139.199.9GSM226553Slice11JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
133.099.9GSM226554Slice12JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
113.699.9GSM226551Slice9JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.132e-1687At3g49700824132ACS9 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9)encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family. Mutants produce elevated levels of ethylene as etiolated seedlings.C.G.S.X.
0.135e-1479At5g65800836709ACS5 (ACC SYNTHASE 5)1-aminocyclopropane-1-carboxylate synthase (ACS) is encoded by a multigene family consisting of at least five members whose expression is induced by hormones, developmental signals, and protein synthesis inhibition.C.G.S.X.
0.163e-1273At2g22810816812ACS4 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 4)key regulatory enzyme in the biosynthesis of the plant hormone ethylene. ACS4 is specifically induced by indoleacetic acid (IAA).C.G.S.X.
0.241e-1171At4g37770829933ACS8Encodes an auxin inducible ACC synthase.C.G.S.X.
0.103e-654At4g11280826730ACS6 (1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID (ACC) SYNTHASE 6)encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene familyC.G.S.X.
0.042e-138At4g26200828726ACS7Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA.C.G.S.X.
0.022e-138At3g191843768753DNA bindingF:DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;POMBC.G.S.X.
0.057e-136At5g28360832921ACS3 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE LIKE PSEUDOGENE)a pseudogene belonging to the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family. Transcript has not been detected.C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-138Glycine maxGma.1332.1.S1_x_atBI970666ACC synthase-2e-8At4g11280ACS6 (1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID (ACC) SYNTHASE 6)C.G.S.X.
0.025e+032Hordeum vulgareContig1752_s_atContig1752--3e-7At1g15270-C.G.S.X.
0.041e+036Oryza sativaOs03g0727600M96672.1-1-aminocyclopropane-1-carboxylate synthase 1 (EC4.4.1.14) (ACC synthase 1) (S-adenosyl-L-methioninemethylthioadenosine-lyase 1)1e+0At5g65800ACS5 (ACC SYNTHASE 5)C.G.S.X.
0.283e-22107Populus trichocarpaPtpAffx.202003.1.S1_atpmrna39961-aminocyclopropane-1-carboxylate-2e-22At4g08040ACS11C.G.S.X.
0.031e-242Triticum aestivumTaAffx.70620.1.S1_atBQ8027051-aminocyclopropane-1-carboxylate synthase-6e-3At4g08040ACS11C.G.S.X.
0.023e+032Vitis vinifera1613802_atCB974339hypothetical protein LOC100245819-4e+0At4g01650-C.G.S.X.
0.021e+034Zea maysZm.1250.2.A1_atAY104390.1Hypothetical protein LOC100191515-6e+0At5g17010sugar transporter family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0009693The chemical reactions and pathways resulting in the formation of ethylene (C2-H4, ethene), a simple hydrocarbon gas that can function in plants as a growth regulator.
LGO:0009058The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage