Gene omics information

Query gene ID At4g07820
Gene name pathogenesis-related protein, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6277.3At4g07820826263pathogenesis-related protein, putativeF:molecular_function unknown;P:unknown;C:endomembrane system, extracellular region;PMFBOS.X.H.G.
0.8391.4At1g70880843425Bet v I allergen family proteinF:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;PS.X.H.G.
0.8190.4At1g33840840280unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFS.X.H.G.
0.8089.8At1g49860841409ATGSTF14Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).S.X.H.G.
0.7486.1At4g08620826426SULTR1High affinity sulfate transporter. Contains STAS domain, essential for sulfur uptake function. Expressed in roots and guard cells. Up-regulated by sulfur deficiency. Down-regulated by cytokinin. Localized to the plasma membrane.S.X.H.G.
0.6579.6At5g52350835311ATEXO70A3 (exocyst subunit EXO70 family protein A3)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.S.X.H.G.
0.6478.9At1g26250839166proline-rich extensin, putativeF:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPBOFVAS.X.H.G.
0.6378.1At2g28270817373DC1 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.6075.7At1g11540837697unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBAPS.X.H.G.
0.5873.8At5g59680836089leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
185.4100.0E-MEXP-828-raw-cel-1156922368
173.6100.0E-MEXP-828-raw-cel-1156922905
154.399.9E-MEXP-828-raw-cel-1156922750
151.499.9E-MEXP-828-raw-cel-1156922318
141.699.9E-MEXP-828-raw-cel-1156922708
136.099.9E-MEXP-828-raw-cel-1156922533
131.199.9E-MEXP-828-raw-cel-1156922829
127.899.9E-MEXP-828-raw-cel-1156922944
115.899.9E-MEXP-828-raw-cel-1156922613
112.299.9E-MEXP-828-raw-cel-1156922794
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.142e-1479At5g26130832682-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBC.G.S.X.
0.171e-344At4g33710829513pathogenesis-related protein, putativeF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFBOC.G.S.X.
0.022e-136At5g07590830652WD-40 repeat protein familyF:molecular_function unknown;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MFBOPC.G.S.X.
0.022e-136At3g09000820052proline-rich family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOBPVAC.G.S.X.
0.039e-134At2g19990816518PR-1-LIKE (PATHOGENESIS-RELATED PROTEIN-1-LIKE)Encodes a PR-1-like protein homolog that is differentially expressed in resistant compared to susceptible cultivars by powdery mildew infection. The deduced amino acid sequence has 24 amino acids comprising the signal peptide and 140 amino acids of the mature peptide (15 kDa). Northern blot analysis showed accumulation of the corresponding mRNA 12 h after inoculation of resistant barley cultivars with Erysiphe graminis. Though the Genbank record for the cDNA associated to this gene model is called 'PR-1', the sequence actually corresponds to PR-1-like. Expression of this gene is not salicylic-acid responsive.C.G.S.X.
0.024e+032At5g41380834140-F:molecular_function unknown;P:biological_process unknown;C:unknown;POMFC.G.S.X.
0.014e+032At5g62670836388AHA11 (Arabidopsis H(+)-ATPase 11)F:ATPase activity;P:cation transport, metabolic process, ATP biosynthetic process;C:plasma membrane, membrane;BMOFPAVC.G.S.X.
0.014e+032At5g58410835954binding / protein binding / zinc ion bindingF:protein binding, binding, zinc ion binding;P:unknown;C:unknown;MFOPBC.G.S.X.
0.014e+032At4g38440830001-F:unknown;P:unknown;C:chloroplast;MFPOBC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-136Glycine maxGmaAffx.7505.1.S1_atAW706843--2e-1At4g07820pathogenesis-related protein, putativeC.G.S.X.
0.047e+030Hordeum vulgareHVSMEf0004E13f_atHVSMEf0004E13f--9e+0At5g65270AtRABA4a (Arabidopsis Rab GTPase homolog A4a)C.G.S.X.
0.042e+034Oryza sativaOs12g02023009640.m00933--4e+0At1g28330DYL1 (DORMANCY-ASSOCIATED PROTEIN-LIKE 1)C.G.S.X.
0.048e-238Populus trichocarpaPtpAffx.210531.1.S1_atpmrna20646hypothetical protein-3e-4At1g18950aminoacyl-tRNA synthetase familyC.G.S.X.
0.044e+032Triticum aestivumTaAffx.7239.1.S1_atCA664369--8e-1At4g09984LCR34 (Low-molecular-weight cysteine-rich 34)C.G.S.X.
0.051e+032Vitis vinifera1611336_atCD799633--2e+0At5g56230PRA1.G2 (PRENYLATED RAB ACCEPTOR 1.G2)C.G.S.X.
0.032e+032Zea maysZm.9845.1.S1_atBM379918hypothetical protein LOC100272820-6e-3At4g33730pathogenesis-related protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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