Gene omics information

Query gene ID At4g05040
Gene name ankyrin repeat family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.146.8At4g05040825846ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOFBPVAS.X.H.G.
0.4355.3At4g081103769905transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.4050.8At2g14660815954unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBMFPAS.X.H.G.
0.2217.5At4g38010829957pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFMBS.X.H.G.
0.1811.4At5g46400834683PRP39-2F:unknown;P:RNA processing;C:intracellular;OMFPBVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
454.6100.0GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
277.3100.0GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
151.699.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
139.899.9GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
138.899.9GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
138.299.9GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
136.299.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
134.699.9GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
132.399.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
119.799.9GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.653e-124446At4g14390827084ankyrin repeat family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBVAC.G.S.X.
0.632e-72274At4g14400827085ACD6 (ACCELERATED CELL DEATH 6)encodes a novel protein with putative ankyrin and transmembrane regions. It is a member of one of the largest uncharacterized gene families in higher plants. The gene is involved in resistance to Pseudomonas syringae.C.G.S.X.
0.321e-55218At4g03470827915ankyrin repeat family proteinF:protein binding;P:unknown;C:unknown;MOPFBVAC.G.S.X.
0.355e-33143At4g03480827906protein bindingF:protein binding;P:biological_process unknown;C:unknown;MOPFBVAC.G.S.X.
0.248e-29129At4g03440827920ankyrin repeat family proteinF:protein binding;P:unknown;C:unknown;MOPBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-138Glycine maxGma.6305.1.S1_atBQ080674--4e+0At2g40340AP2 domain-containing transcription factor, putative (DRE2B)C.G.S.X.
0.022e+034Hordeum vulgareHVSMEg0011O24r2_atHVSMEg0011O24r2--1e+0At4g05040ankyrin repeat family proteinC.G.S.X.
0.014e-138Oryza sativaOs05g0203000AK107744.1-Conserved hypothetical protein9e-2At3g46900COPT2C.G.S.X.
0.028e-240Populus trichocarpaPtpAffx.223820.1.S1_atpmrna42026hypothetical protein-2e+0At5g43513-C.G.S.X.
0.024e+034Triticum aestivumTa.26977.1.S1_atCD454900--5e+0At5g54460wound-responsive protein-relatedC.G.S.X.
0.023e-136Vitis vinifera1622741_atCB343444--2e-1At4g05040ankyrin repeat family proteinC.G.S.X.
0.012e-240Zea maysZm.12222.1.A1_atBQ048339--8e-9At1g20580small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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