Gene omics information

Query gene ID At4g05020
Gene name NDB2 (NAD(P)H dehydrogenase B2)
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2217.5At4g05020825844NDB2 (NAD(P)H dehydrogenase B2)F:disulfide oxidoreductase activity, oxidoreductase activity, FAD binding;P:unknown;C:extrinsic to mitochondrial inner membrane, mitochondrion;BOFPAMS.X.H.G.
0.6781.6At4g22530828348embryo-abundant protein-relatedF:methyltransferase activity;P:metabolic process;C:cellular_component unknown;BPFMOAS.X.H.G.
0.6781.6At5g51830835258pfkB-type carbohydrate kinase family proteinF:kinase activity, ribokinase activity;P:response to cadmium ion;C:cellular_component unknown;BOPAMFS.X.H.G.
0.124.9At3g25610822148haloacid dehalogenase-like hydrolase family proteinF:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;P:metabolic process, phospholipid transport, ATP biosynthetic process;C:plasma membrane;MBOFPAVS.X.H.G.
0.061.4At5g63790836499ANAC102 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 102)Encodes a member of the NAC family of transcription factors. ANAC102 appears to have a role in mediating response to low oxygen stress (hypoxia) in germinating seedlings.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
55.999.8GSM134421St.Clair_1-118_348_Van-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5756Expression Level Polymorphism Project (ELP) - Van-0
34.899.7GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
33.999.7GSM275643flu_2hGSE10876Expression data from Arabidopsis thaliana (Ler) rosette leaves after the release of singlet oxygen inside plastids
30.999.7GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
29.299.7GSM131325AtGen_6-3521_Saltstress-Roots-12.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.7901005At4g21490828234NDB3F:NADH dehydrogenase activity;P:unknown;C:unknown;BOFPAMC.G.S.X.
0.203e-25117At2g20800816609NDB4 (NAD(P)H dehydrogenase B4)F:NADH dehydrogenase activity;P:unknown;C:extrinsic to mitochondrial inner membrane, mitochondrion, plastid;BOFPAMC.G.S.X.
0.136e-1169At4g28220828937NDB1 (NAD(P)H dehydrogenase B1)F:disulfide oxidoreductase activity, NADH dehydrogenase activity;P:unknown;C:extrinsic to mitochondrial inner membrane;BOFPAMC.G.S.X.
0.024e-344At2g29990817549NDA2 (ALTERNATIVE NAD(P)H DEHYDROGENASE 2)F:NADH dehydrogenase activity, oxidoreductase activity, FAD binding;P:unknown;C:intrinsic to mitochondrial inner membrane;BOFPAMC.G.S.X.
0.034e-344At1g07180837229NDA1 (ALTERNATIVE NAD(P)H DEHYDROGENASE 1)Internal NAD(P)H dehydrogenase in mitochondria. The predicted protein sequence has high homology with other designated NAD(P)H DHs from microorganisms; the capacity for matrix NAD(P)H oxidation via the rotenone-insensitive pathway is significantly reduced in the Atndi1 mutant plant line; the in vitro translation product of AtNDI1 is imported into isolated mitochondria and located on the inside of the inner membrane.C.G.S.X.
0.012e-138At5g52280835304protein transport protein-relatedF:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOBFPAVC.G.S.X.
0.012e-138At5g02270831709ATNAP9member of NAP subfamilyC.G.S.X.
0.012e-138At4g00950827948MEE47 (maternal effect embryo arrest 47)F:transcription factor activity;P:embryonic development ending in seed dormancy, regulation of transcription;C:cellular_component unknown;PMFOC.G.S.X.
0.022e-138At3g23460821927cyclopropane fatty acid synthase-relatedF:cyclopropane-fatty-acyl-phospholipid synthase activity;P:lipid biosynthetic process;C:chloroplast;OBPFMC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.196e-21103Glycine maxGmaAffx.64627.1.S1_atBI316267--4e-16At4g21490NDB3C.G.S.X.
0.223e-1789Hordeum vulgareContig7354_atContig7354--9e-17At4g05020NDB2 (NAD(P)H dehydrogenase B2)C.G.S.X.
0.151e-759Oryza sativaOs05g0331200AK100884.1-External rotenone-insensitive NADPH dehydrogenase7e-8At4g05020NDB2 (NAD(P)H dehydrogenase B2)C.G.S.X.
0.331e-25119Populus trichocarpaPtpAffx.163938.1.S1_s_atAJ769446hypothetical protein-5e-39At4g21490NDB3C.G.S.X.
0.161e-1895Triticum aestivumTa.8832.1.S1_atBJ294317--2e-18At4g05020NDB2 (NAD(P)H dehydrogenase B2)C.G.S.X.
0.181e-49196Vitis vinifera1621765_atCD004023--3e-49At4g05020NDB2 (NAD(P)H dehydrogenase B2)C.G.S.X.
0.133e-550Zea maysZm.1869.1.S1_atBU051083hypothetical protein LOC100274336-8e-5At4g05020NDB2 (NAD(P)H dehydrogenase B2)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

00190Link to KEGG PATHWAYOxidative phosphorylation
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