Gene omics information

Query gene ID At4g04540
Gene name protein kinase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2014.4At4g04540825785protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.3338.1At3g11010820272AtRLP34 (Receptor Like Protein 34)F:protein binding, kinase activity;P:signal transduction, defense response;C:cellular_component unknown;PMOBFAVS.X.H.G.
0.2930.3At2g29120817460ATGLR2.7member of Putative ligand-gated ion channel subunit familyS.X.H.G.
0.2522.6At1g17600838336disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAS.X.H.G.
0.2522.6At2g32680817828AtRLP23 (Receptor Like Protein 23)F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
38.199.8GSM1330512793GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
33.399.7GSM1330482790GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
31.299.7GSM142816SS002_ATH1_A8-smith-14hGSE6174Gene expression and carbohydrate metabolism through the diurnal cycle
31.099.7E-MEXP-807-raw-cel-1173273252
28.099.7E-MEXP-739-raw-cel-1099467303
27.499.7E-MEXP-807-raw-cel-1173273116
27.299.7GSM1330502791GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
26.799.7GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
26.099.7GSM142800SS001_ATH1_A3-Smith-23GSE6174Gene expression and carbohydrate metabolism through the diurnal cycle
25.999.7GSM142811SS002_ATH1_A3-smith-02hGSE6174Gene expression and carbohydrate metabolism through the diurnal cycle
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.7901489At4g04570825789protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.399e-174611At4g04490825779protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.341e-101371At4g04500825780protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.321e-92341At4g04510825781protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.082e-861At4g11480826753protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.071e-656At4g11470826752protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.041e-656At4g23220828421kinaseF:kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.042e-552At4g00960827937protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.072e-1171Glycine maxGmaAffx.64035.1.S1_atBI497646--7e-12At4g04540protein kinase family proteinC.G.S.X.
0.033e-550Hordeum vulgareContig6958_s_atContig6958--8e-5At4g23190CRK11 (CYSTEINE-RICH RLK11)C.G.S.X.
0.048e-654Oryza sativaOs07g0541800AK102941.1-KI domain interacting kinase 15e-6At4g04540protein kinase family proteinC.G.S.X.
0.061e-346Populus trichocarpaPtpAffx.225233.1.S1_atpmrna44425hypothetical protein-2e-11At4g21366ATP binding / protein tyrosine kinaseC.G.S.X.
0.032e-242Triticum aestivumTaAffx.94232.1.S1_atCA658145--1e-2At2g30740serine/threonine protein kinase, putativeC.G.S.X.
0.025e-342Vitis vinifera1618005_atCD009831--1e-3At1g48220ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseC.G.S.X.
0.027e-342Zea maysZm.18367.1.S1_atCO526734--3e-9At5g03730CTR1 (CONSTITUTIVE TRIPLE RESPONSE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006468The process of introducing a phosphate group on to a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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