Gene omics information

Query gene ID At4g04490
Gene name protein kinase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7083.5At4g04490825779protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.6781.6At5g52760835353heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PS.X.H.G.
0.6277.3At1g35210840410unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;POS.X.H.G.
0.6176.7At5g05300830412unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.6176.7At1g56060842057unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFS.X.H.G.
0.6176.7At2g27310817274F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5974.7At2g23270816859unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.5974.7At3g57460824913catalytic/ metal ion binding / metalloendopeptidase/ zinc ion bindingF:metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding;P:proteolysis;C:cellular_component unknown;MBFPOS.X.H.G.
0.5974.7At4g28460828963unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.5873.8At2g32140817773transmembrane receptorF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane, chloroplast;PBOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
832.9100.0E-MEXP-807-raw-cel-1173272948
375.7100.0E-MEXP-807-raw-cel-1173273252
269.8100.0E-MEXP-807-raw-cel-1173273144
127.399.9E-MEXP-807-raw-cel-1173273088
121.299.9E-MEXP-807-raw-cel-1173273116
85.199.9GSM131329AtGen_6-3621_Saltstress-Roots-24.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
76.099.9GSM131325AtGen_6-3521_Saltstress-Roots-12.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
72.599.9E-MEXP-807-raw-cel-1173273032
62.299.8GSM131330AtGen_6-3622_Saltstress-Roots-24.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
55.699.8GSM142852MG001_ATH1_A5-Torres-2N3GSE6176Impact of Type III effectors on plant defense responses
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.380680At4g04570825789protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.320676At4g04500825780protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.391e-163577At4g04540825785protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.289e-137488At4g04510825781protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.061e-965At4g11470826752protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.044e-963At4g23140828413CRK6 (CYSTEINE-RICH RLK 6)Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307)C.G.S.X.
0.034e-963At4g23160828415protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOFBVAC.G.S.X.
0.012e-861At5g37450833722leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.039e-240Glycine maxGmaAffx.64035.1.S1_atBI497646--7e-12At4g04540protein kinase family proteinC.G.S.X.
0.071e-138Hordeum vulgareContig25378_atContig25378--9e-18At4g21390B120C.G.S.X.
0.045e-448Oryza sativaOs05g0493100AK110420.1-KI domain interacting kinase 16e-15At4g23190CRK11 (CYSTEINE-RICH RLK11)C.G.S.X.
0.079e-550Populus trichocarpaPtpAffx.225656.1.S1_atpmrna45153hypothetical protein-3e-15At4g38830protein kinase family proteinC.G.S.X.
0.027e-240Triticum aestivumTaAffx.77639.1.S1_atCA744867--1e-3At4g23180CRK10 (CYSTEINE-RICH RLK10)C.G.S.X.
0.031e-654Vitis vinifera1612959_atCB339907--2e-3At4g27300S-locus protein kinase, putativeC.G.S.X.
0.023e-550Zea maysZm.18367.1.S1_atCO526734--3e-9At5g03730CTR1 (CONSTITUTIVE TRIPLE RESPONSE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006468The process of introducing a phosphate group on to a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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