Gene omics information

Query gene ID At4g04480
Gene name -
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3643.6At3g12910820475transcription factorF:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PS.X.H.G.
0.3338.1At1g76430843976phosphate transporter family proteinF:phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport;C:membrane;BFMPOAS.X.H.G.
0.061.4At1g79680844307wall-associated kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system, integral to membrane;MPOBFVAS.X.H.G.
0.030.6At5g47960834847ATRABA4CEncodes a small molecular weight g-protein.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
692.0100.0GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
216.0100.0GSM39196RRE1_Chitin2GSE2169rre1 and rre2 mutants
185.5100.0GSM39211RRE2_Chitin1GSE2169rre1 and rre2 mutants
151.799.9GSM48127Col_CSC3GSE2538Chitin Oligomer Experiment
143.499.9GSM39212RRE2_Chitin2GSE2169rre1 and rre2 mutants
115.299.9GSM48126Col_CSC2GSE2538Chitin Oligomer Experiment
95.199.9GSM176876AWP_AL_Txed_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
81.799.9GSM39205Col_Chitin3GSE2169rre1 and rre2 mutants
80.199.9GSM39197RRE1_Chitin3GSE2169rre1 and rre2 mutants
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.443e-52206At4g22030828292F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PC.G.S.X.
0.011e-138At1g80660844405AHA9F:hydrogen-exporting ATPase activity, phosphorylative mechanism;P:proton transport;C:plasma membrane;BMOFPAVC.G.S.X.
0.016e-136At5g64290836550DIT2.1 (DICARBOXYLATE TRANSPORT 2.1)F:oxoglutarate:malate antiporter activity;P:malate transport, response to nematode;C:chloroplast, membrane, chloroplast envelope;BOPAMFVC.G.S.X.
0.016e-136At4g139926240793-F:molecular_function unknown;P:intracellular signaling cascade;C:mitochondrion;POMC.G.S.X.
0.026e-136At4g21500828235unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POC.G.S.X.
0.016e-136At3g02650821285pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFBAC.G.S.X.
0.016e-136At2g06210815177ELF8 (EARLY FLOWERING 8)Encodes a yeast CTR9 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast CTR9 is a component of a five-member PAF1 complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5'] regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin.C.G.S.X.
0.026e-136At2g33850817954unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMFPBAVC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-138Glycine maxGma.5277.1.S1_atBM091884--5e-2At3g59870unknown proteinC.G.S.X.
0.021e+034Hordeum vulgareContig22100_atContig22100--9e-1At2g23440unknown proteinC.G.S.X.
0.025e+034Oryza sativaOs06g0542100AK111086.1-Hypothetical protein1e+0At5g42330unknown proteinC.G.S.X.
0.091e-242Populus trichocarpaPtpAffx.225323.1.S1_atpmrna44587hypothetical protein-1e-2At4g04480-C.G.S.X.
0.022e+034Triticum aestivumTaAffx.53216.1.S1_x_atCA695235--1e+1At3g10350anion-transporting ATPase family proteinC.G.S.X.
0.053e-961Vitis vinifera1614431_atCB971111hypothetical protein LOC100252001 /// hypothetical protein LOC100257348 /// hypothetical protein LOC100264220-6e-2At5g42530unknown proteinC.G.S.X.
0.022e+130Zea maysZm.8639.1.A1_atBM332170--2e+1At5g58600PMR5 (POWDERY MILDEW RESISTANT 5)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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