Gene omics information

Query gene ID At4g04450
Gene name WRKY42
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6378.1At4g04450825775WRKY42member of WRKY Transcription Factor; Group II-bS.X.H.G.
0.7184.2At1g05290837025transcription factorF:transcription factor activity;P:regulation of transcription;C:unknown;POS.X.H.G.
0.6882.2At2g3959081854440S ribosomal protein S15A (RPS15aC)F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit;BOMAPFS.X.H.G.
0.6781.6At1g212903766772transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.6378.1At3g45320823670unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.6277.3At5g27940832861WPP3 (WPP domain protein 3)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.6176.7At4g26440828750WRKY34 (WRKY DNA-BINDING PROTEIN 34)member of WRKY Transcription Factor; Group IS.X.H.G.
0.6075.7At4g24950828597unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5974.7At5g52490835325fibrillarin, putativeF:RNA binding;P:rRNA processing;C:nucleus;MOFAPBVS.X.H.G.
0.5570.6At1g05040839338unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
301.7100.0GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
270.2100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
264.2100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
237.0100.0GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
227.3100.0GSM142735DH001_ATH1_A2-BCP1GSE6162Transcriptome analysis of Arabidopsis microgametogenesis
199.3100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
194.0100.0GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
191.3100.0GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
191.0100.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
163.399.9GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.441e-119430At4g22070828296WRKY31member of WRKY Transcription Factor; Group II-bC.G.S.X.
0.163e-43176At1g62300842527WRKY6transcription factor WRKY6 (WRKY6)C.G.S.X.
0.123e-34147At4g01720828001WRKY47member of WRKY Transcription Factor; Group II-bC.G.S.X.
0.049e-1065At5g15130831365WRKY72member of WRKY Transcription Factor; Group II-bC.G.S.X.
0.072e-757At1g68150843143WRKY9member of WRKY Transcription Factor; Group II-bC.G.S.X.
0.022e-448At4g31800829308WRKY18Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Constitutive expression of WRKY18 enhanced resistance to P. syringae, but its coexpression with WRKY40 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.C.G.S.X.
0.063e-344At1g18860838467WRKY61member of WRKY Transcription Factor; Group II-bC.G.S.X.
0.021e-242At1g69810843317WRKY36member of WRKY Transcription Factor; Group II-bC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.184e-28127Glycine maxGmaAffx.83326.2.S1_atBU081884WRKY34 protein-2e-23At4g22070WRKY31C.G.S.X.
0.026e+032Hordeum vulgareEBro08_SQ008_K12_atEBro08_SQ008_K12--7e+0At5g47000peroxidase, putativeC.G.S.X.
0.091e-759Oryza sativaOs01g02896009629.m01807-DNA-binding WRKY domain containing protein3e-4At4g01720WRKY47C.G.S.X.
0.142e-26121Populus trichocarpaPtpAffx.217349.1.S1_atpmrna32570hypothetical protein-2e-26At4g04450WRKY42C.G.S.X.
0.069e-756Triticum aestivumTa.5433.1.S1_a_atCA623872--8e-16At1g62300WRKY6C.G.S.X.
0.029e-134Vitis vinifera1618288_atCF202459.1--3e-3At1g0110060S acidic ribosomal protein P1 (RPP1A)C.G.S.X.
0.025e+032Zea maysZm.8191.1.A1_atBM073226hypothetical protein LOC100278647-2e+0At4g09270unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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