Gene omics information

Query gene ID At4g03480
Gene name protein binding
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g03480827906protein bindingF:protein binding;P:biological_process unknown;C:unknown;MOPFBVAS.X.H.G.
0.5065.3At2g34280817989S locus F-box-related / SLF-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.4659.8At1g44980841063pectinesterase family proteinF:pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMS.X.H.G.
0.4253.9At1g54230841864DNA bindingF:DNA binding;P:nucleosome assembly;C:nucleus, nucleosome;PFS.X.H.G.
0.4253.9At3g18460821375unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOS.X.H.G.
0.4152.4At4g037003769889transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.3846.7At2g39160818501unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.3745.0At1g22720838878wall-associated kinase, putativeF:protein tyrosine kinase activity, protein kinase activity, kinase activity, calcium ion binding, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;PMOFVBS.X.H.G.
0.3439.8At2g43450818946unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.3338.1At4g13320826962unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
689.1100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
363.2100.0GSM133766Lindsey_1-18_torpedo-root_Rep3_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
222.0100.0GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
209.0100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
194.6100.0GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
190.1100.0GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
173.8100.0GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
170.9100.0GSM176876AWP_AL_Txed_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
163.899.9GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
160.599.9GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.548e-66252At4g03440827920ankyrin repeat family proteinF:protein binding;P:unknown;C:unknown;MOPBFVAC.G.S.X.
0.396e-39163At4g05040825846ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOFBPVAC.G.S.X.
0.308e-29129At4g03470827915ankyrin repeat family proteinF:protein binding;P:unknown;C:unknown;MOPFBVAC.G.S.X.
0.215e-24113At4g14390827084ankyrin repeat family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBVAC.G.S.X.
0.195e-1893At4g14400827085ACD6 (ACCELERATED CELL DEATH 6)encodes a novel protein with putative ankyrin and transmembrane regions. It is a member of one of the largest uncharacterized gene families in higher plants. The gene is involved in resistance to Pseudomonas syringae.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e-346Glycine maxGmaAffx.20718.2.S1_atBQ299018--2e-1At4g03460ankyrin repeat family proteinC.G.S.X.
0.022e+034Hordeum vulgareHVSMEf0001G07r2_atHVSMEf0001G07r2--1e+0At1g10830sodium symporter-relatedC.G.S.X.
0.017e+034Oryza sativaOs01g05920009629.m03908--1e+0At1g44224-C.G.S.X.
0.011e+036Populus trichocarpaPtpAffx.22833.1.S1_atDN486047--2e+0At2g12475-C.G.S.X.
0.024e+034Triticum aestivumTaAffx.52927.1.S1_atCA698859--8e-1At5g08400unknown proteinC.G.S.X.
0.021e+034Vitis vinifera1610760_atCF211090hypothetical protein LOC100254718-1e-88At5g66760SDH1-1C.G.S.X.
0.022e+034Zea maysZm.10426.2.A1_atAI668524--3e+0At2g40610ATEXPA8 (ARABIDOPSIS THALIANA EXPANSIN A8)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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