Gene omics information

Query gene ID At4g02970
Gene name AT7SL-1 (Arabidopsis 7SL RNA 1)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g02970828121AT7SL-1 (Arabidopsis 7SL RNA 1)Signal recognition particle. Type 4 of RNA polymerase III dependent genes.S.X.H.G.
0.9396.4At4g25510828655unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8894.0At3g57900824959unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8491.9At2g40440818638BTB/POZ domain-containing proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;PMOS.X.H.G.
0.8391.4At1g52430841674ubiquitin carboxyl-terminal hydrolase-relatedF:ubiquitin thiolesterase activity;P:ubiquitin-dependent protein catabolic process;C:cellular_component unknown;POBMFS.X.H.G.
0.8190.4At1g54880841927unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8190.4At4g16050827290unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBVAS.X.H.G.
0.8089.8At2g13900815874DC1 domain-containing proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOS.X.H.G.
0.8089.8At5g14560831307unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7989.1At5g66370836769unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
364.2100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
325.4100.0GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
323.3100.0GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
319.7100.0GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
309.7100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
304.3100.0GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
297.3100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
291.4100.0GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
287.6100.0GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
286.2100.0GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.8601277At4g03350827964ubiquitin family proteinF:molecular_function unknown;P:protein modification process;C:unknown;MPOFVC.G.S.X.
0.303e-42173At4g02950828123ubiquitin family proteinF:molecular_function unknown;P:protein modification process;C:cellular_component unknown;PMOVFBC.G.S.X.
0.293e-42173At4g03360827958ubiquitin family proteinF:molecular_function unknown;P:protein modification process;C:cellular_component unknown;PMOFVBC.G.S.X.
0.179e-30131At4g03370827951ubiquitin family proteinF:molecular_function unknown;P:protein modification process;C:unknown;MPOFVBC.G.S.X.
0.062e-1273At4g05250825873ubiquitin family proteinF:molecular_function unknown;P:protein modification process;C:cellular_component unknown;PMOFBVC.G.S.X.
0.047e-961At4g05310825879ubiquitin family proteinF:molecular_function unknown;P:protein modification process;C:cellular_component unknown;POMFBVC.G.S.X.
0.067e-961At4g05260825874ubiquitin family proteinF:molecular_function unknown;P:protein modification process;C:cellular_component unknown;POC.G.S.X.
0.157e-961At4g05230825871ubiquitin family proteinF:molecular_function unknown;P:protein modification process;C:cellular_component unknown;MPFOVC.G.S.X.
0.074e-756At4g05240825872ubiquitin family proteinF:molecular_function unknown;P:protein modification process;C:cellular_component unknown;PMOC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Glycine maxHgAffx.17875.1.S1_atCB278515--1e+1At4g31310avirulence-responsive protein-related / avirulence induced gene (AIG) protein-relatedC.G.S.X.
0.038e-134Hordeum vulgareHVSMEg0013O09r2_x_atHVSMEg0013O09r2--3e+0At4g11370RHA1AC.G.S.X.
Os09g031200000.02Oryza sativaOs07g02647669634.m02570--3e-1At5g46860VAM3C.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.18867.1.A1_atCV230761--1e+0At4g02970AT7SL-1 (Arabidopsis 7SL RNA 1)C.G.S.X.
0.054e-136Triticum aestivumTaAffx.111038.1.S1_atCA678011--2e-1At4g02970AT7SL-1 (Arabidopsis 7SL RNA 1)C.G.S.X.
0.035e-134Vitis vinifera1616774_atCF568877--4e+0At5g42957unknown proteinC.G.S.X.
0.031e+130Zea maysZmAffx.966.1.S1_atAI677247--8e-1At5g47830unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006464The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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