Gene omics information

Query gene ID At4g02450
Gene name glycine-rich protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.135.8At4g02450828006glycine-rich proteinF:molecular_function unknown;P:unknown;C:plasma membrane;BMOPFVAS.X.H.G.
0.4050.8At1g07660837279histone H4F:DNA binding;P:nucleosome assembly;C:plasma membrane, chloroplast;MOPFVS.X.H.G.
0.4050.8At2g28740817423HIS4histone 4S.X.H.G.
0.114.1At1g08780837400AIP3 (ABI3-INTERACTING PROTEIN 3)F:unfolded protein binding;P:protein folding;C:prefoldin complex;MFOPAS.X.H.G.
0.071.9At4g17520827467nuclear RNA-binding protein, putativeF:RNA binding;P:biological_process unknown;C:nucleus, peroxisome;MBOPFVAS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
50.299.8GSM284385Arabidopsis GEP6GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
40.699.8GSM311282Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
38.599.8GSM311281Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
37.499.7GSM311273Laser capture microdissected (LCM) embryo proper at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
36.299.7GSM311274Laser capture microdissected (LCM) embryo proper at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
33.099.7GSM284384Arabidopsis GEP5GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
29.099.7E-ATMX-13-raw-cel-1556149743
26.499.7E-ATMX-13-raw-cel-1556149823
26.499.7GSM311277Laser capture microdissected (LCM) peripheral endosperm at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
24.499.6GSM284390Arabidopsis GPE2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.026e-652At3g23990821983HSP60 (HEAT SHOCK PROTEIN 60)mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria.C.G.S.X.
0.034e-446At2g33210817883HSP60-2 (HEAT SHOCK PROTEIN 60-2)F:ATP binding;P:response to salt stress, inflammatory response;C:mitochondrion, plasma membrane, chloroplast;BOMFPAVC.G.S.X.
0.012e-240At4g33620829502Ulp1 protease family proteinF:cysteine-type peptidase activity;P:proteolysis;C:cellular_component unknown;MFPOVC.G.S.X.
0.012e-240At1g20670838655DNA-binding bromodomain-containing proteinF:DNA binding;P:biological_process unknown;C:cellular_component unknown;OMFPBVC.G.S.X.
0.029e-238At5g40280834026ERA1 (ENHANCED RESPONSE TO ABA 1)encodes a beta subunit of farnesyl-trans-transferase, which is involved in meristem organization and ABA-mediated signal transduction pathway. Mutant phenotypes have been observed in meristem organization, and response to abscisic acid and drought.C.G.S.X.
0.019e-238At1g71350843476eukaryotic translation initiation factor SUI1 family proteinF:RNA binding, translation initiation factor activity;P:translational initiation;C:unknown;MFOPAC.G.S.X.
0.024e-136At4g39960830157DNAJ heat shock family proteinF:unfolded protein binding, heat shock protein binding, ATP binding;P:protein folding, response to heat;C:chloroplast thylakoid membrane, chloroplast;OBMFPAVC.G.S.X.
0.014e-136At4g23200828419protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:vacuole;MPOBFVAC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.092e-1273Glycine maxPsAffx.psHA011iA09r_atPsAffx.psHA011iA09r--9e-1At2g33210HSP60-2 (HEAT SHOCK PROTEIN 60-2)C.G.S.X.
0.077e-754Hordeum vulgareContig26163_atContig26163--4e-7At4g02450glycine-rich proteinC.G.S.X.
0.202e-757Oryza sativaOs.10188.1.S1_at---0C.G.S.X.
0.063e-240Populus trichocarpaPtpAffx.219880.1.S1_atpmrna36036hypothetical protein-1e-2At4g02450glycine-rich proteinC.G.S.X.
0.082e-344Triticum aestivumTaAffx.84899.1.S1_atCA627396--1e-3At4g02450glycine-rich proteinC.G.S.X.
0.162e-342Vitis vinifera1618562_atCF512114hypothetical protein LOC100258848-8e-3At4g02450glycine-rich proteinC.G.S.X.
0.122e-446Zea maysZm.14502.1.S1_atCO531791co-chaperone protein SBA1-6e-4At4g02450glycine-rich proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage