Gene omics information

Query gene ID At4g02280
Gene name SUS3 (sucrose synthase 3)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8290.9At4g02280828081SUS3 (sucrose synthase 3)Encodes a protein with sucrose synthase activity (SUS3).S.X.H.G.
0.9496.7At2g19900816509ATNADP-ME1 (NADP-malic enzyme 1)The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME1 is expressed in response to developmental and cell-specific signals.S.X.H.G.
0.9195.6At1g02700839492unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PMFOS.X.H.G.
0.9195.6At1g27990839692unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8894.0At5g42290834234transcription activator-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.8894.0At4g27530828862unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8894.0At5g607608361972-phosphoglycerate kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPBAFVS.X.H.G.
0.8693.1At2g42560818856late embryogenesis abundant domain-containing protein / LEA domain-containing proteinF:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;BOMPFVAS.X.H.G.
0.8693.1At5g45310834567unknown proteinF:unknown;P:unknown;C:endomembrane system;OMVBFPAS.X.H.G.
0.8592.4At3g05260819690short-chain dehydrogenase/reductase (SDR) family proteinF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
460.6100.0E-MEXP-1443-raw-cel-1581869573
454.6100.0GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
262.1100.0GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
192.8100.0GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
152.699.9GSM131707ATGE_84_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
149.899.9GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)
148.199.9GSM131705ATGE_83_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
141.899.9GSM131703ATGE_83_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
118.099.9GSM131303AtGen_6-2611_Osmoticstress-Shoots-24.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
115.699.9GSM10456WT Post-Mature Green Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.202e-30135At3g43190823393SUS4Encodes a protein with sucrose synthase activity (SUS4).C.G.S.X.
0.243e-26121At5g20830832206SUS1 (SUCROSE SYNTHASE 1)Encodes a protein with sucrose synthase activity (SUS1).C.G.S.X.
0.272e-24115At5g49190834978SUS2 (SUCROSE SYNTHASE 2)Encodes a putative sucrose synthase (SUS2). The activity of the enzyme could not be assayed as proved to be insoluble (PMID 17257168). Induced specifically by O(2) deficiency.C.G.S.X.
0.092e-861At5g37180833692SUS5Encodes a protein with sucrose synthase activity (SUS5).C.G.S.X.
0.071e-656At1g73370843672SUS6 (SUCROSE SYNTHASE 6)Encodes a protein with sucrose synthase activity (SUS6).C.G.S.X.
0.018e-240At5g36870833654ATGSL09 (glucan synthase-like 9)encodes a gene similar to callose synthaseC.G.S.X.
0.018e-240At3g14070820622CAX9 (CATION EXCHANGER 9)Involved in cation (K, Na and Mn) homeostasis and transportC.G.S.X.
0.013e-138At1g48840841306unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.314e-26121Glycine maxGma.17921.2.S1_s_atBM085020--7e-27At4g02280SUS3 (sucrose synthase 3)C.G.S.X.
0.167e-1065Hordeum vulgareContig460_s_atContig460sucrose synthase-6e-12At5g20830SUS1 (SUCROSE SYNTHASE 1)C.G.S.X.
0.234e-1481Oryza sativaOs03g0340500AK102158.1-Sucrose synthase3e-14At4g02280SUS3 (sucrose synthase 3)C.G.S.X.
0.282e-24115Populus trichocarpaPtpAffx.23657.1.S1_s_atBP928698hypothetical protein-6e-42At5g49190SUS2 (SUCROSE SYNTHASE 2)C.G.S.X.
0.125e-654Triticum aestivumTa.93.1.S1_atM26672.1sucrose synthase type 2-3e-26At5g20830SUS1 (SUCROSE SYNTHASE 1)C.G.S.X.
0.275e-31135Vitis vinifera1609402_atBQ794844hypothetical protein LOC100267606-1e-30At4g02280SUS3 (sucrose synthase 3)C.G.S.X.
0.173e-1583Zea maysZm.3478.1.S1_a_atAY124703.1sucrose synthase2-4e-47At5g49190SUS2 (SUCROSE SYNTHASE 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0005986The chemical reactions and pathways resulting in the formation of sucrose, the disaccharide fructofuranosyl-glucopyranoside.
LGO:0005985The chemical reactions and pathways involving sucrose, the disaccharide fructofuranosyl-glucopyranoside.
LGO:0009058The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00021Link to KaPPA-View 4Cellulose biosynthesis
00022Link to KaPPA-View 4Biosynthesis and metabolism of sucrose
00359Link to KaPPA-View 4Glucosyltransferase



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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