Gene omics information

Query gene ID At4g02270
Gene name pollen Ole e 1 allergen and extensin family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8693.1At4g02270828083pollen Ole e 1 allergen and extensin family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.9597.0At4g25820828687XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)Encodes a xyloglucan endotransglycosylase with a clear preference for non-fucosylated xyloglucan polymer.S.X.H.G.
0.9496.7At4g25790828684allergen V5/Tpx-1-related family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBVAS.X.H.G.
0.9396.4At5g35190833473proline-rich extensin-like family proteinF:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MFPOBVAS.X.H.G.
0.9396.4At5g22410832302peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOS.X.H.G.
0.9296.0At5g67400836876peroxidase 73 (PER73) (P73) (PRXR11)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOS.X.H.G.
0.9296.0At3g49960824158peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOS.X.H.G.
0.9195.6At2g20520816574FLA6 (FASCICLIN-LIKE ARABINOGALACTAN 6)fasciclin-like arabinogalactan-protein 6 (Fla6)S.X.H.G.
0.9195.6At4g26010828707peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOS.X.H.G.
0.9195.6At4g40090830172AGP3 (arabinogalactan-protein 3)F:unknown;P:multicellular organismal development;C:endomembrane system;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
356.3100.0GSM226539L9SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
139.699.9GSM226540L10SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
84.899.9GSM142754MJ001_ATH1_A5-jones-WT-Rep3GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
81.499.9GSM142750MJ001_ATH1_A1-jones-WT1GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
79.399.9GSM142751MJ001_ATH1_A2-jones-WT2GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
76.899.9GSM226538L8SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
61.499.8GSM226541L11SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
50.199.8GSM142730CH001_ATH1_A009-Hampt-wsc_repeatGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
45.599.8GSM226553Slice11JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
45.399.8GSM265461Arabidopsis, whole roots, standard conditions, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.012e-136At5g49430835003transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MFOBPAVC.G.S.X.
0.031e+034At3g26520822259TIP2 (TONOPLAST INTRINSIC PROTEIN 2)gamma tonoplast intrinsic protein 2 (TIP2). expressed throughout the plant and transcript level is increased upon NaCl or ABA treatments. NaCl stress-sensitive yeast mutant strains exhibit more resistance to salt when expressing this protein.C.G.S.X.
0.031e+034At3g02310821151SEP2 (SEPALLATA 2)MADS-box protein, binds K domain of AG in vivoC.G.S.X.
0.011e+034At3g18524821383MSH2 (MUTS HOMOLOG 2)Encodes a DNA mismatch repair homolog of human MutS gene, MSH6. MSH2 is involved in maintaining genome stability and repressing recombination of mismatched heteroduplexes.There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2 has different binding specificity to different mismatches in combination with MSH3, MSH6, or MSH7.C.G.S.X.
0.011e+034At2g13540815840ABH1 (ABA HYPERSENSITIVE 1)Encodes a nuclear cap-binding protein that forms a heterodimeric complex with CBP20 and is involved in ABA signaling and flowering. Mutants are early flowering and exhibit hypersensitive response to ABA in germination inhibition.Loss of ABH1 function results in abnormal processing of mRNAs for several important floral regulators (FLC, CO, FLM). Analysis of loss of function mutations suggests a role in pri-miRNA processing and mRNA splicing. Note that two different mutant alleles were given the same name abh1-7 (Kuhn et al 2007; Kim et al 2008). To avoid confusion, abh1-7 described in Kim et al (2008) has been renamed abh1-107 (other names: ensalada-1, ens-1).C.G.S.X.
0.034e+032At5g60910836212AGL8 (agamous-like 8)MADS box gene negatively regulated by APETALA1C.G.S.X.
0.034e+032At5g23260832390TT16 (TRANSPARENT TESTA16)Encodes a MADS box protein. Regulates proanthocyanidin biosynthesis in the inner-most cell layer of the seed coat. Also controls cell shape of the inner-most cell layer of the seed coat. Also shown to be necessary for determining the identity of the endothelial layer within the ovule.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.045e+032Glycine maxGmaAffx.58650.1.S1_atBE021790--3e-28At1g06960small nuclear ribonucleoprotein U2B, putative / spliceosomal protein, putativeC.G.S.X.
0.042e+032Hordeum vulgareHW05N04u_atHW05N04u--4e+0At4g02270pollen Ole e 1 allergen and extensin family proteinC.G.S.X.
0.047e+032Oryza sativaOs11g05065009639.m02814--3e+0At4g02270pollen Ole e 1 allergen and extensin family proteinC.G.S.X.
0.043e-136Populus trichocarpaPtpAffx.212355.1.S1_atpmrna24218hypothetical protein-2e-1At4g02270pollen Ole e 1 allergen and extensin family proteinC.G.S.X.
0.041e+034Triticum aestivumTa.6853.1.A1_atCD913631--8e-5At4g33050EDA39 (embryo sac development arrest 39)C.G.S.X.
0.033e-134Vitis vinifera1619785_atCF203346.1hypothetical protein LOC100256218-3e-26At4g21110G10 family proteinC.G.S.X.
0.022e+032Zea maysZm.12202.1.A1_atBG549493Galactinol synthase 1-3e-5At1g09350AtGolS3 (Arabidopsis thaliana galactinol synthase 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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