Gene omics information

Query gene ID At4g02150
Gene name MOS6 (MODIFIER OF SNC1, 6)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3541.6At4g02150827472MOS6 (MODIFIER OF SNC1, 6)Encodes IMPORTIN ALPHA 3. Mutant plants act as suppressors of snc1 response and salicylic acid accumulation. Located in the nucleus. Involved in protein import. Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.S.X.H.G.
0.4862.5At1g15660838135CENP-C (CENTROMERE PROTEIN C)Encodes a homologue of the human centromeric protein C (CENP-C). CENP-C co-localizes with the 180 bp centromeric regions of chromosomes throughout the cell cycle, but does not completely cover the 180 bp regions.S.X.H.G.
0.4659.8At1g50490841471UBC20 (ubiquitin-conjugating enzyme 20)Encodes one of two ubiquitin-conjugating enzymes belonging to the E2-C gene family (the other being UBC19). Transcript is always found in diving cells, but also in other non-dividing cells.S.X.H.G.
0.3846.7At2g01120814641ORC4 (ORIGIN RECOGNITION COMPLEX SUBUNIT 4)Origin Recognition Complex subunit 4. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with all ORC subunits except ORC1b.S.X.H.G.
0.2522.6At2g16780816179MSI2 (MULTICOPY SUPPRESSOR OF IRA1 2)Encodes a WD-40 repeat protein similar to yeast MSI1.S.X.H.G.
0.2217.5At3g06030819774ANP3 (ARABIDOPSIS NPK1-RELATED PROTEIN KINASE 3)NPK1-related protein kinase 3S.X.H.G.
0.2014.4At2g40550818650ETG1 (E2F TARGET GENE 1)Encodes a nuclear localized target of E2Fa-DPa, transcription factors controlling cell cycle progression.S.X.H.G.
0.2014.4At1g08130837333ATLIG1 (ARABIDOPSIS THALIANA DNA LIGASE 1)Encodes the Arabidopsis DNA ligase 1 that provides the major DNA ligase activity in cells and plays a key role in both DNA replication and excision repair pathways. Indispensable for cell viability. AtLIG1 expresses one major and two minor mRNA transcripts differing only in the length of the 5' untranslated leader sequences preceding a common ORF. Translation from the first in-frame start codon produces an AtLIG1 isoform that is targeted exclusively to the mitochondria. Translation initiation from the second in-frame start codon produces an AtLIG1 isoform targeted only to the nucleus.S.X.H.G.
0.2014.4At1g20590838648cyclin, putativeF:cyclin-dependent protein kinase regulator activity;P:regulation of cell cycle;C:endomembrane system, nucleus;MPOFS.X.H.G.
0.135.8At5g51590835233DNA-binding protein-relatedF:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMFOVBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
46.599.8GSM133950Murray_2-6_T10-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studies
37.399.7E-MEXP-1797-raw-cel-1669767958
35.199.7GSM133951Murray_2-7_T12-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studies
30.599.7E-MEXP-1797-raw-cel-1669767976
28.499.7GSM133952Murray_2-8_T14-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studies
28.499.7GSM242956Steroid day 1 (day1D2)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
28.399.7GSM134204Murray_3-2_D3-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cells
27.599.7GSM142905WW002_ATH1_A1-willa-CON-REP3GSE6181Assembly of the cell wall pectic matrix.
27.099.7E-ATMX-31-raw-cel-1516947899
26.199.7GSM242958Mock day 3 (day3E2)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.594e-157555At1g02690839517IMPA-6 (IMPORTIN ALPHA ISOFORM 6)Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.C.G.S.X.
0.294e-1583At3g06720819857IMPA-1 (IMPORTIN ALPHA ISOFORM 1)Encodes importin alpha involved in nuclear import. Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.C.G.S.X.
0.253e-963At4g16143827302IMPA-2 (IMPORTIN ALPHA ISOFORM 2)Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.C.G.S.X.
0.108e-756At1g09270837448IMPA-4 (IMPORTIN ALPHA ISOFORM 4)Protein interacts with Agrobacterium proteins VirD2 and VirE2.C.G.S.X.
0.103e-654At5g49310834991IMPA-5 (IMPORTIN ALPHA ISOFORM 5)Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.162e-861Glycine maxGma.7528.2.S1_atBM891312--3e-49At4g16143IMPA-2 (IMPORTIN ALPHA ISOFORM 2)C.G.S.X.
0.171e-1687Hordeum vulgareContig3615_atContig3615--6e-15At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)C.G.S.X.
0.191e-759Oryza sativaOs01g0253300AB004660.1-Importin alpha 26e-24At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)C.G.S.X.
0.304e-28127Populus trichocarpaPtpAffx.52325.1.S1_s_atCX659919hypothetical protein-3e-28At4g02150MOS6 (MODIFIER OF SNC1, 6)C.G.S.X.
0.152e-1377Triticum aestivumTa.28018.1.S1_atCK159354--2e-27At4g16143IMPA-2 (IMPORTIN ALPHA ISOFORM 2)C.G.S.X.
0.172e-1789Vitis vinifera1607723_atCF568821--5e-18At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)C.G.S.X.
0.166e-1581Zea maysZm.4271.2.S1_a_atAY103821.1hypothetical protein LOC100193437-2e-20At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0006952Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
CGO:0006886The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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