Gene omics information

Query gene ID At4g01410
Gene name harpin-induced family protein / HIN1 family protein / harpin-responsive family protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g01410828166harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PS.X.H.G.
0.5065.3At5g60460836167sec61beta family proteinF:protein transporter activity;P:protein transport;C:plasma membrane;MFPOBS.X.H.G.
0.2930.3At3g15260820757protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:unknown;C:unknown;MPOFBVAS.X.H.G.
0.2930.3At1g55190841962PRA7F:unknown;P:vesicle-mediated transport;C:endoplasmic reticulum, plasma membrane;PMFOS.X.H.G.
0.2830.3At1g69800843316CBS domain-containing proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;MOBPAFS.X.H.G.
0.2726.2At4g27780828891ACBP2 (ACYL-COA BINDING PROTEIN ACBP 2)Encodes acyl-CoA-binding protein with ankyrin repeatsS.X.H.G.
0.2726.2At1g69295843261PDCB4 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4)Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.S.X.H.G.
0.2217.5At5g52420835318unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endoplasmic reticulum;PS.X.H.G.
0.2115.8At4g23930828493-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.2014.4At3g16190820865isochorismatase hydrolase family proteinF:catalytic activity;P:metabolic process;C:cellular_component unknown;BOFAPS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
74.399.9GSM134206Murray_3-3_D5-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cells
72.499.9GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
71.699.9GSM134208Murray_3-4_D7-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cells
60.999.8GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
51.899.8GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
47.299.8GSM131707ATGE_84_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
44.499.8GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)
36.799.7GSM131701ATGE_82_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.022e-240At3g24540822050protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVAC.G.S.X.
0.029e-238At1g31310840019hydroxyproline-rich glycoprotein family proteinF:transcription factor activity;P:regulation of transcription;C:unknown;MPOBFVAC.G.S.X.
0.019e-238At1g73360843671HDG11 (HOMEODOMAIN GLABROUS 11)Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. It is involved in trichome branching.C.G.S.X.
0.013e-136At5g35390833500leucine-rich repeat transmembrane protein kinase, putativeEncodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis.C.G.S.X.
0.013e-136At5g51920835267catalytic/ pyridoxal phosphate bindingF:pyridoxal phosphate binding, catalytic activity;P:biological_process unknown;C:chloroplast;BOPMFAC.G.S.X.
0.013e-136At4g33430829480BAK1 (BRI1-ASSOCIATED RECEPTOR KINASE)Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome.C.G.S.X.
0.023e-136At4g10650826658GTP bindingF:GTP binding;P:biological_process unknown;C:intracellular;BOMPFC.G.S.X.
0.013e-136At4g12010826809disease resistance protein (TIR-NBS-LRR class), putativeF:protein binding, transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAVC.G.S.X.
0.013e-136At3g29060822550-F:unknown;P:unknown;C:integral to membrane;MFPOVBAC.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.071e-138Glycine maxGma.14567.1.S1_atBE824123--9e-2At4g01410harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinC.G.S.X.
0.033e+032Hordeum vulgareEBro07_SQ001_D09_atEBro07_SQ001_D09--4e-11At1g47560unknown proteinC.G.S.X.
0.032e-138Oryza sativaOs02g07436009630.m04999--4e+0At4g11870unknown proteinC.G.S.X.
0.035e-136Populus trichocarpaPtpAffx.223177.1.S1_x_atpmrna41050hypothetical protein-3e-1At4g01410harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinC.G.S.X.
0.033e-136Triticum aestivumTaAffx.4410.1.S1_atCA742632--7e-1At4g01630ATEXPA17 (ARABIDOPSIS THALIANA EXPANSIN A17)C.G.S.X.
0.034e-134Vitis vinifera1616806_atCF605749hypothetical protein LOC100259004-6e-2At2g01340unknown proteinC.G.S.X.
0.032e+032Zea maysZm.8611.1.A1_atBM339289hypothetical protein LOC100276849-1e-1At5g19590unknown proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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