Gene omics information

Query gene ID At4g00750
Gene name dehydration-responsive family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g00750825923dehydration-responsive family proteinF:unknown;P:biological_process unknown;C:Golgi apparatus;PBOS.X.H.G.
0.4355.3At3g17470821012RelA/SpoT domain-containing protein / calcium-binding EF-hand family proteinF:GTP diphosphokinase activity, calcium ion binding;P:guanosine tetraphosphate metabolic process;C:chloroplast;BOMFPAS.X.H.G.
0.103.4At3g63520825527CCD1 (CAROTENOID CLEAVAGE DIOXYGENASE 1)Encodes a protein with 9-cis-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including β-carotene, lutein, zeaxanthin, and all-trans-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-cis-double or allenic bonds.S.X.H.G.
0.082.3At2g03390814868uvrB/uvrC motif-containing proteinF:DNA binding, nuclease activity;P:nucleotide-excision repair;C:chloroplast;OBMFPS.X.H.G.
0.071.9At3g10230820185LYC (LYCOPENE CYCLASE)Encodes a protein with lycopene β-cyclase activity. This enzyme uses the linear, symmetrical lycopene as substrate. However, unlike the ε-cyclase which adds only one ring, the β-cyclase introduces a ring at both ends of lycopene to form the bicyclic β-carotene.S.X.H.G.
0.051.1At3g46590823812TRFL1 (TRF-LIKE 1)Encodes a protein that specifically binds plant telomeric DNA (TTTAGGG)n repeats. Involved in bending DNA. Expressed throughout the plant with highest levels in flowers.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
84.599.9GSM311284Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
84.599.9GSM142902WW001_ATH1_A1-WILLA-CONGSE6181Assembly of the cell wall pectic matrix.
76.699.9GSM266667Arabidopsis, root cells, columella root cap, -Fe, replicate 2GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
75.699.9GSM266668Arabidopsis, root cells, columella root cap, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
71.799.9GSM184893Arabidopsis, root cells, columella root cap, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
71.499.9GSM142904WW002_ATH1_A1-willa-CON-REP2GSE6181Assembly of the cell wall pectic matrix.
70.999.9GSM147966lec1-1 Globular Stage Seed 2GSE1051Seed development in LEAFY COTYLEDON1 mutants
67.399.8GSM147964WT Globular Stage Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
57.999.8GSM147963WT Globular Stage Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
53.199.8GSM147965lec1-1 Globular Stage Seed 1GSE1051Seed development in LEAFY COTYLEDON1 mutants
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.312e-54214At2g45750819183dehydration-responsive family proteinF:unknown;P:biological_process unknown;C:unknown;PBOC.G.S.X.
0.032e-1171At1g33170840213dehydration-responsive family proteinF:unknown;P:biological_process unknown;C:unknown;PBOAMC.G.S.X.
0.067e-1169At4g10440826636dehydration-responsive family proteinF:unknown;P:unknown;C:unknown;PBOAC.G.S.X.
0.054e-654At1g26850839229dehydration-responsive family proteinF:unknown;P:unknown;C:Golgi apparatus, membrane;PBOC.G.S.X.
0.043e-448At1g31850840075dehydration-responsive protein, putativeF:unknown;P:biological_process unknown;C:Golgi apparatus;PBOFAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.112e-861Glycine maxGmaAffx.41555.1.S1_atAW781650--3e-16At2g45750dehydration-responsive family proteinC.G.S.X.
0.053e-859Hordeum vulgareContig8454_atContig8454--2e-14At1g33170dehydration-responsive family proteinC.G.S.X.
0.068e-963Oryza sativaOs06g0103900AK111870.1-Putative methyltransferase DUF248 family protein3e-10At4g10440dehydration-responsive family proteinC.G.S.X.
0.252e-30135Populus trichocarpaPtpAffx.213065.1.S1_atpmrna25567hypothetical protein-1e-30At4g00750dehydration-responsive family proteinC.G.S.X.
0.071e-346Triticum aestivumTaAffx.16144.1.S1_atCD492111--6e-4At4g00750dehydration-responsive family proteinC.G.S.X.
0.106e-24111Vitis vinifera1607184_atCB981964hypothetical protein LOC100258938-8e-24At4g00750dehydration-responsive family proteinC.G.S.X.
0.054e-756Zea maysZm.1344.1.A1_atCA402844--9e-7At4g00750dehydration-responsive family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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