CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At4g00400

Gene name GPAT8 (glycerol-3-phosphate acyltransferase 8)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.91 95.6 At4g00400 828140 GPAT8 (glycerol-3-phosphate acyltransferase 8) Involved in cutin assembly. Is functional redundant of GPAT4. S.X. H.G.
0.50 65.3 At4g23820 828482 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA S.X. H.G.
0.43 55.3 At1g61900 842486 unknown protein F:molecular_function unknown;P:biological_process unknown;C:anchored to plasma membrane, plasma membrane, anchored to membrane;P S.X. H.G.
0.40 50.8 At2g26250 817165 KCS10 (3-KETOACYL-COA SYNTHASE 10) epidermis-specific, encodes KCS10, a putative 3-ketoacyl-CoA synthase. probably involved in the synthesis of long-chain lipids found in the cuticle. S.X. H.G.
0.40 50.8 At2g45470 819155 FLA8 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8) F:unknown;P:unknown;C:anchored to plasma membrane, apoplast, plasma membrane, anchored to membrane, plant-type cell wall;OBPMVFA S.X. H.G.
0.33 38.1 At1g01430 837247 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;PF S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
20.0 99.6 GSM131184 AtGen_D-16_1-WS_REP1_ATH1 GSE5617 AtGenExpress: Light treatments
18.6 99.5 GSM131211 AtGen_D-45_3-BS_REP3_ATH1 GSE5617 AtGenExpress: Light treatments
18.3 99.5 GSM131207 AtGen_D-41_3-DS_REP3_ATH1 GSE5617 AtGenExpress: Light treatments
18.3 99.5 GSM131173 AtGen_D-5_1-BL_REP1_ATH1 GSE5617 AtGenExpress: Light treatments
18.3 99.5 GSM131214 AtGen_D-48_3-WS_REP3_ATH1 GSE5617 AtGenExpress: Light treatments
18.2 99.5 GSM131187 AtGen_D-20_2-RL_REP2_ATH1 GSE5617 AtGenExpress: Light treatments
17.6 99.5 E-MEXP-715-raw-cel-1121836247
17.5 99.5 GSM131171 AtGen_D-3_1-PL_REP1_ATH1 GSE5617 AtGenExpress: Light treatments
17.5 99.5 GSM131178 AtGen_D-10_1-FS_REP1_ATH1 GSE5617 AtGenExpress: Light treatments
17.5 99.5 GSM131204 AtGen_D-38_3-AL_REP3_ATH1 GSE5617 AtGenExpress: Light treatments
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.80 0 965 At1g01610 839297 GPAT4 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 4) Encodes a protein with glycerol-3-phosphate acyltransferase activity. Involved in cutin assembly. Is functional redundant of GPAT8. C.G. S.X.
0.02 2e-4 48 At1g06520 837163 GPAT1 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 1) Encodes a membrane associated mitochondrial localized protein with glycerol-3-phosphate acyltransferase activity.Expressed in flower buds and siliques. Homozygous mutant plants are male sterile and have abnormal glycerolipid levels. C.G. S.X.
0.03 8e-4 46 At3g11430 820316 GPAT5 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5) Encodes a protein with glycerol-3-phosphate acyltransferase activity, involved in the biosynthesis of suberin polyester. C.G. S.X.
0.02 5e-2 40 At2g38110 818389 GPAT6 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6) Encodes a protein with glycerol-3-phosphate acyltransferase activity. C.G. S.X.
0.03 7e-1 36 At5g06090 830496 GPAT7 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 7) Encodes a protein with glycerol-3-phosphate acyltransferase activity. C.G. S.X.
0.01 7e-1 36 At2g03550 814884 hydrolase F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BMOPFAV C.G. S.X.
0.01 7e-1 36 At2g41810 818780 - F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PB C.G. S.X.
0.01 7e-1 36 At1g62440 842542 LRX2 (LEUCINE-RICH REPEAT/EXTENSIN 2) encodes a paralog of LRX1 (LEUCINE-RICH REPEAT/EXTENSIN 1) which acts synergistically with LRX1 in root hair cell morphogenesis. C.G. S.X.
0.03 7e-1 36 At1g02390 839558 GPAT2 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 2) Encodes a member of a family of proteins with glycerol-3-phosphate acyltransferase activity. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.25 7e-36 153 Glycine max GmaAffx.51326.1.S1_at BE330049 - - 1e-36 At4g00400 GPAT8 (glycerol-3-phosphate acyltransferase 8) C.G. S.X.
0.02 4e-4 46 Hordeum vulgare Contig6715_at Contig6715 - - 4e-10 At2g38110 GPAT6 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6) C.G. S.X.
0.04 2e-3 46 Oryza sativa Os05g0457800 9633.m03556 - Phospholipid/glycerol acyltransferase familyprotein 1e-11 At3g11430 GPAT5 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5) C.G. S.X.
0.23 3e-19 97 Populus trichocarpa PtpAffx.27985.1.S1_at CV233330 hypothetical protein - 2e-19 At4g00400 GPAT8 (glycerol-3-phosphate acyltransferase 8) C.G. S.X.
0.02 3e+0 34 Triticum aestivum TaAffx.25794.1.S1_at CA696000 - - 1e+0 At3g07390 AIR12 C.G. S.X.
0.09 4e-6 52 Vitis vinifera 1613538_at CB969057 hypothetical protein LOC100243093 - 6e-6 At4g00400 GPAT8 (glycerol-3-phosphate acyltransferase 8) C.G. S.X.
0.02 1e+0 34 Zea mays Zm.8775.2.A1_at AI065673 - - 9e-1 At3g23830 GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0010143 The chemical reactions and pathways resulting in the formation of cutin, a waxy substance, which combined with cellulose forms a substance nearly impervious to water and constituting the cuticle in plants.
C GO:0008152 The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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