Gene omics information

Query gene ID At3g63380
Gene name calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3541.6At3g63380825513calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12)F:calmodulin binding, calcium-transporting ATPase activity;P:calcium ion transport, cation transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAVS.X.H.G.
0.4355.3At4g23210828420protein kinase family proteinEncodes a Cysteine-rich receptor-like kinase (CRK13). Overexpression of CRK13 leads to hypersensitive response cell death, and induces defense against pathogens by causing increased accumulation of salicylic acid.S.X.H.G.
0.3643.6At2g42360818837zinc finger (C3HC4-type RING finger) family proteinF:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVS.X.H.G.
0.3541.6At4g22470828342protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;MBOPFVAS.X.H.G.
0.3133.8At1g51800841606leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
0.2930.3At1g57630842139disease resistance protein (TIR class), putativeF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PS.X.H.G.
0.1710.2At1g26420839184FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
175.3100.0E-MEXP-98-raw-cel-320188859
174.6100.0E-MEXP-1443-raw-cel-1581869803
147.999.9E-MEXP-1443-raw-cel-1581869745
145.099.9E-MEXP-98-raw-cel-320188804
140.099.9E-MEXP-807-raw-cel-1173272948
120.799.9GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transition
119.199.9E-MEXP-98-raw-cel-320189024
118.799.9E-MEXP-98-raw-cel-320189079
116.499.9E-MEXP-1094-raw-cel-1379507313
84.099.9E-MEXP-1094-raw-cel-1379507273
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.192e-33145At3g22910821863calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13)F:calmodulin binding, calcium-transporting ATPase activity;P:cation transport, calcium ion transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAVC.G.S.X.
0.011e-450At2g22950816826calcium-transporting ATPase, plasma membrane-type, putative / Ca2+-ATPase, putative (ACA7)F:calmodulin binding, calcium-transporting ATPase activity;P:calcium ion transport, cation transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAVC.G.S.X.
0.054e-448At4g37640829918ACA2 (CALCIUM ATPASE 2)Encodes a calmodulin-regulated Ca(2+)-pump located in the endoplasmic reticulum. Belongs to plant 2B ATPase's with an N-terminal autoinhibitor.C.G.S.X.
0.013e-242At5g65330836658AGL78 (AGAMOUS-LIKE 78)F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;POFMC.G.S.X.
0.013e-242At4g11250826727AGL52F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;POFC.G.S.X.
0.013e-242At4g022352745602AGL51F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PFC.G.S.X.
0.041e-140At5g57110835815ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane.C.G.S.X.
0.011e-140At4g29900829112ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10)one of the type IIB calcium pump isoforms. encodes an autoinhibited Ca(2+)-ATPase that contains an N-terminal calmodulin binding autoinhibitory domain.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.064e-1481Glycine maxGma.3527.1.S1_atAW733755--7e-69At3g21180ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)C.G.S.X.
0.053e-654Hordeum vulgareContig25293_atContig25293--5e-52At3g21180ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)C.G.S.X.
0.043e-656Oryza sativaOs10g0418100AK109037.1-Calcium-transporting ATPase 8, plasmamembrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 8)1e-7At3g22910calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13)C.G.S.X.
0.376e-81303Populus trichocarpaPtpAffx.205722.1.S1_atpmrna11294autoinhibited calcium ATPase-4e-81At3g63380calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12)C.G.S.X.
0.047e-654Triticum aestivumTa.9178.1.S1_atCD452861--7e-17At4g29900ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10)C.G.S.X.
0.112e-34147Vitis vinifera1616662_atCF404703hypothetical protein LOC100254645-2e-34At3g63380calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12)C.G.S.X.
0.083e-654Zea maysZm.17277.1.S1_atCF273093--1e-45At5g57110ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006754The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
LGO:0006812The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells.
LGO:0006816The directed movement of calcium (Ca) ions into, out of, within or between cells.
LGO:0008152The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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