Gene omics information

Query gene ID At3g63110
Gene name ATIPT3 (ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 3)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2319.3At3g63110825486ATIPT3 (ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 3)Encodes cytokinin synthase involved in cytokinin biosynthesis. IPT3 subcellular localization is modulated by farnesylation- when farnesylated it is localized to the nucleus, otherwise to the chloroplast.S.X.H.G.
0.6781.6At1g78815844218LSH7 (LIGHT SENSITIVE HYPOCOTYLS 7)F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMS.X.H.G.
0.6781.6At5g63580836477FLS2 (FLAVONOL SYNTHASE 2)encodes a protein whose sequence is similar to flavonol synthaseS.X.H.G.
0.4253.9At5g65040836628senescence-associated protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.2726.2At1g01070839550nodulin MtN21 family proteinF:unknown;P:unknown;C:membrane;BPOAFMS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
171.0100.0GSM142624MC002_ATH1_A1.2-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
170.8100.0GSM142651MC002_ATH1_A10.2-dubos-wthGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
162.499.9GSM142650MC002_ATH1_A10.1-dubos-wthGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
161.899.9GSM142652MC002_ATH1_A10.3-dubos-wthGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
135.999.9GSM142642MC002_ATH1_A7.2-dubos-wLhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
129.399.9GSM142637MC002_ATH1_A5.3-dubos-5kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
128.399.9GSM142626MC002_ATH1_A2.1-dubos-wtcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
120.099.9GSM142625MC002_ATH1_A1.3-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
116.799.9GSM142643MC002_ATH1_A7.3-dubos-wLhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
116.699.9GSM142631MC002_ATH1_A3.3-dubos-6kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.072e-654At5g19040832023IPT5Encodes cytokinin synthase.C.G.S.X.
0.021e-138At3g23630821943ATIPT7Encodes an isopentenyl transferase involved in cytokinin biosynthesis.C.G.S.X.
0.015e-136At5g43390834357-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPFVBC.G.S.X.
0.025e-136At3g50560824220short-chain dehydrogenase/reductase (SDR) family proteinF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAC.G.S.X.
0.015e-136At3g16400820887NSP1 (NITRILE SPECIFIER PROTEIN 1)Encodes a nitrile-specifier protein NSP1 responsible for constitutive and herbivore-induced simple nitrile formation in rosette leaves. NSP1 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation.C.G.S.X.
0.025e-136At1g68460843175ATIPT1 (isopentenyltransferase 1)Encodes a putative adenylate isopentenyltransferase which catalyzes the formation of isopentenyladenosine 5'-monophosphate (iPMP) from AMP and dimethylallylpyrophosphate (DMAPP). Involved in cytokinin biosynthesis.C.G.S.X.
0.045e-136At1g25410839127ATIPT6AB061404 Arabidopsis thaliana AtIPT6 mRNA for cytokinin synthase, complete cdsC.G.S.X.
0.012e+034At5g43820834404-F:unknown;P:biological_process unknown;C:unknown;POFMBC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.037e-136Glycine maxGmaAffx.54522.1.A1_atBG511804--1e+0At3g30247-C.G.S.X.
0.022e+130Hordeum vulgareEBro08_SQ010_D12_atEBro08_SQ010_D12--2e-1At5g03550-C.G.S.X.
0.024e+034Oryza sativaOs02g02181009630.m01149--3e+0At1g62333unknown proteinC.G.S.X.
0.037e-136Populus trichocarpaPtpAffx.214595.1.S1_s_atpmrna28364cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// hypothetical protein-3e-5At5g36140CYP716A2C.G.S.X.
0.028e+032Triticum aestivumTaAffx.31647.1.S1_atCA610846--1e+0At2g34000zinc finger protein-relatedC.G.S.X.
0.032e+032Vitis vinifera1614480_atCF210101--1e+0At4g18090unknown proteinC.G.S.X.
0.022e-136Zea maysZm.10086.1.A1_a_atBM379200--3e-1At3g63110ATIPT3 (ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009691The chemical reactions and pathways resulting in the formation of cytokinins, a class of adenine-derived compounds that can function in plants as growth regulators.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00051Link to KaPPA-View 4Cytokinin metabolism



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00908Link to KEGG PATHWAYZeatin biosynthesis
01070Link to KEGG PATHWAYBiosynthesis of plant hormones
01100Link to KEGG PATHWAYMetabolic pathways
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