Gene omics information

Query gene ID At3g63040
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7184.2At3g63040825479unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.8994.6At1g03880839383CRU2 (CRUCIFERIN 2)Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.S.X.H.G.
0.8793.5At4g271508288232S seed storage protein 2 / 2S albumin storage protein / NWMU2-2S albumin 2F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;POS.X.H.G.
0.8693.1At4g271408288222S seed storage protein 1 / 2S albumin storage protein / NWMU1-2S albumin 1F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;PMOS.X.H.G.
0.8693.1At4g271708288252S seed storage protein 4 / 2S albumin storage protein / NWMU2-2S albumin 4F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;POS.X.H.G.
0.7888.6At4g27160828824AT2S3F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;POS.X.H.G.
0.7385.5At3g27660822388OLEO4 (OLEOSIN 4)Encodes oleosin4 (Plant Cell, 2006, 18:1961), a protein found in oil bodies, involved in seed lipid accumulation. Functions in freezing tolerance of seeds. Note: also referred to as OLE3 in Plant Journal 2008, 55:798.S.X.H.G.
0.7385.5At4g25140828617OLEO1 (OLEOSIN 1)Encodes oleosin1, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.S.X.H.G.
0.6579.6At4g26740828781ATS1 (ARABIDOPSIS THALIANA SEED GENE 1)Gene is expressed preferentially in the embryo, has similarity to a rice ABA-responsive gene, EFA27.S.X.H.G.
0.5773.8At3g01570821106glycine-rich protein / oleosinF:molecular_function unknown;P:lipid storage;C:monolayer-surrounded lipid storage body, integral to membrane, membrane;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
377.7100.0GSM305282estradiol induced, biological replicate 1GSE12137LEAFY COTYLEDON1 is a key regulator of fatty acid biosynthesis in Arabidopsis thaliana
314.5100.0GSM10453WT Mature Green Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
292.2100.0E-ATMX-1-raw-cel-1112746267
287.3100.0E-ATMX-1-raw-cel-1112746209
250.6100.0GSM305284estradiol induced, biological replicate 2GSE12137LEAFY COTYLEDON1 is a key regulator of fatty acid biosynthesis in Arabidopsis thaliana
249.4100.0E-ATMX-1-raw-cel-1112746095
238.6100.0E-ATMX-1-raw-cel-1112746154
220.3100.0GSM131697ATGE_81_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
214.6100.0GSM131698ATGE_81_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
202.0100.0GSM131699ATGE_81_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.032e-240At5g42860834297unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;POFMBC.G.S.X.
0.022e-240At5g51290835203ceramide kinase-relatedF:diacylglycerol kinase activity;P:activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway;C:cellular_component unknown;MOPBFC.G.S.X.
0.037e-238At2g26850817226F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOC.G.S.X.
0.033e-136At4g17530827468ATRAB1CF:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:plasma membrane, vacuole, membrane;MOFPBVAC.G.S.X.
0.033e-136At1g76800844014nodulin, putativeF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOPFAC.G.S.X.
0.011e+034At5g55820835676unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPVAC.G.S.X.
0.021e+034At5g24820832551aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PFC.G.S.X.
0.031e+034At5g5460083554950S ribosomal protein L24, chloroplast (CL24)F:structural constituent of ribosome;P:translation;C:chloroplast stroma, chloroplast, large ribosomal subunit;BOMPFC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+034Glycine maxPsAffx.CL1301Contig1_s_atPsAffx.CL1301Contig1--2e+0At3g63040unknown proteinC.G.S.X.
0.032e+032Hordeum vulgareContig24031_atContig24031--4e-16At2g44270ATP bindingC.G.S.X.
0.032e+034Oryza sativaOsAffx.26431.1.S1_at---0C.G.S.X.
0.031e-138Populus trichocarpaPtpAffx.25435.2.A1_atCV266716hypothetical protein-1e-1At3g63040unknown proteinC.G.S.X.
0.045e+032Triticum aestivumTaAffx.28773.1.S1_atCA656360--9e-1At4g11630ribosomal protein L19 family proteinC.G.S.X.
0.033e-134Vitis vinifera1612521_s_atCB977361hypothetical protein LOC100267499-3e-1At3g49580LSU1 (RESPONSE TO LOW SULFUR 1)C.G.S.X.
0.035e-134Zea maysZm.5904.1.A1_atAW091094hypothetical protein LOC100278561-2e-5At2g21600ATRER1BC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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