Gene omics information

Query gene ID At3g62710
Gene name glycosyl hydrolase family 3 protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6781.6At3g62710825445glycosyl hydrolase family 3 proteinF:xylan 1,4-beta-xylosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:endomembrane system;BOFPAMS.X.H.G.
0.9095.1At2g18470816362protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MOPBFVAS.X.H.G.
0.8994.6At2g23900816922glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;PFBOMAS.X.H.G.
0.8693.1At5g20410832163MGD2Encodes a type B monogalactosyldiacylglycerol (MGDG) synthase. Strongly induced by phosphate deprivation, and in non-photosynthetic tissues. Does not contribute to galactolipid synthesis under Pi-sufficient conditions but does under Pi starvation.S.X.H.G.
0.8491.9At1g55560842005sks14 (SKU5 Similar 14)F:oxidoreductase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOAS.X.H.G.
0.8391.4At3g54800824645pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing proteinF:phosphoinositide binding;P:signal transduction;C:unknown;POMS.X.H.G.
0.8391.4At5g50830835155unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;OMFBPVAS.X.H.G.
0.8190.4At2g26410817181Iqd4 (IQ-domain 4)F:calmodulin binding;P:unknown;C:unknown;PMOBVFAS.X.H.G.
0.7989.1At1g14420838004AT59F:lyase activity, pectate lyase activity;P:plant-type cell wall organization;C:endomembrane system;PBFOS.X.H.G.
0.7989.1At4g36490829801SFH12 (SEC14-LIKE 12)F:phosphatidylinositol transporter activity, transporter activity;P:transport;C:unknown;MPFOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
147.199.9E-ATMX-35-raw-cel-1574334848
141.799.9GSM154507Arabidopsis growing pollen tubes rep1GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
126.999.9E-ATMX-35-raw-cel-1574334880
122.799.9GSM154503Arabidopsis desiccated mature pollen grains rep1GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
120.999.9E-MEXP-285-raw-cel-440782791
120.799.9E-MEXP-1138-raw-cel-1432773098
118.499.9GSM154508Arabidopsis growing pollen tubes rep2GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
117.199.9GSM154505Arabidopsis hydrated pollen grains rep1GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
116.899.9E-MEXP-285-raw-cel-440782725
108.799.9E-MEXP-1138-raw-cel-1432773002
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.093e-1067At5g20950832220glycosyl hydrolase family 3 proteinF:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:cell wall, membrane, plant-type cell wall;BOFPAMC.G.S.X.
0.057e-859At5g04885830368glycosyl hydrolase family 3 proteinF:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:plasma membrane, anchored to membrane;BOFPAMC.G.S.X.
0.027e-550At3g47000823853glycosyl hydrolase family 3 proteinF:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:cellular_component unknown;BOFPAMC.G.S.X.
0.051e-346At5g20940832219glycosyl hydrolase family 3 proteinF:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:endomembrane system;BOFPAMC.G.S.X.
0.022e-242At3g47050823858glycosyl hydrolase family 3 proteinF:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:vacuole;BOFPAMC.G.S.X.
0.016e-240At4g19530827695disease resistance protein (TIR-NBS-LRR class), putativeEncodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.062e-242Glycine maxGma.16696.1.S1_atBI971040beta-D-glucan exohydrolase-2e-44At5g20950glycosyl hydrolase family 3 proteinC.G.S.X.
0.053e-240Hordeum vulgareContig4970_atContig4970--1e-9At5g20950glycosyl hydrolase family 3 proteinC.G.S.X.
0.061e-1069Oryza sativaOs03g0749300AK065044.1-Exoglucanase precursor3e-8At5g20950glycosyl hydrolase family 3 proteinC.G.S.X.
0.071e-1069Populus trichocarpaPtpAffx.207518.1.S1_atpmrna14929hypothetical protein-5e-24At5g20940glycosyl hydrolase family 3 proteinC.G.S.X.
0.067e-550Triticum aestivumTa.27010.3.S1_atBJ301684--4e-8At5g20940glycosyl hydrolase family 3 proteinC.G.S.X.
0.011e+034Vitis vinifera1617551_atCF607794hypothetical protein LOC100249114-4e-19At2g24270ALDH11A3C.G.S.X.
0.022e+034Zea maysZm.1588.1.S1_atAY344632.1beta-glucanase-5e-9At3g47050glycosyl hydrolase family 3 proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0005975The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00412Link to KaPPA-View 4Glycoside Hydrolase



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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