CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g62270

Gene name anion exchange family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.39 48.4 At3g62270 825400 anion exchange family protein F:anion exchanger activity;P:anion transport;C:integral to membrane, membrane;MFPOBV S.X. H.G.
0.72 84.8 At5g17330 831599 GAD Encodes one of two isoforms of glutamate decarboxylase. S.X. H.G.
0.62 77.3 At5g39970 833994 catalytic F:catalytic activity;P:biological_process unknown;C:anchored to membrane;OBPMAF S.X. H.G.
0.52 67.4 At3g53480 824516 PDR9 (PLEIOTROPIC DRUG RESISTANCE 9) F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:plasma membrane;BOMAFPV S.X. H.G.
0.52 67.4 At4g30170 829140 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB S.X. H.G.
0.50 65.3 At1g15210 838087 PDR7 (PLEIOTROPIC DRUG RESISTANCE 7) F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:plasma membrane, chloroplast, membrane;BOMFAPV S.X. H.G.
0.48 62.5 At2g14100 815896 CYP705A13 a member of the cytochrome P450 family S.X. H.G.
0.46 59.8 At1g22440 838850 alcohol dehydrogenase, putative F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:cellular_component unknown;BOPFMAV S.X. H.G.
0.44 57.2 At5g44380 834464 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:response to oxidative stress;C:cell wall;BFOPAM S.X. H.G.
0.43 55.3 At1g69810 843317 WRKY36 member of WRKY Transcription Factor; Group II-b S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
104.9 99.9 GSM184518 Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
101.7 99.9 GSM184516 Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
77.6 99.9 GSM184493 Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
49.3 99.8 GSM184486 Epidermis&Cortex root cells 2hr KCl control treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
48.1 99.8 GSM184511 Pericycle root cells 2hr continuous KNO3 treated, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
48.0 99.8 GSM184488 Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
46.7 99.8 GSM184492 Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
44.9 99.8 GSM184521 Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
42.4 99.8 GSM184508 Pericycle root cells 2hr transitory KNO3 treated, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
40.6 99.8 E-MEXP-635-raw-cel-912819824
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Homologous genes

Paralogous genes

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HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.82 0 1766 At2g47160 819329 BOR1 (REQUIRES HIGH BORON 1) Boron transporter. Protein accumulates in shoots and roots under conditions of boron deficiency and is degraded within several hours of restoring boron supply. Localized to the plasma membrane under B limitation, and to the cytoplasm after B application before degradation. Protein is transferred via the endosomes to the vacuole for degradation. C.G. S.X.
0.27 2e-26 121 At3g06450 819821 anion exchange family protein F:anion exchanger activity;P:anion transport;C:plasma membrane;MFPOBV C.G. S.X.
0.03 2e-2 42 At4g32510 829386 anion exchanger F:anion exchanger activity;P:anion transport;C:integral to membrane, membrane;MFPOBV C.G. S.X.
0.03 2e-2 42 At1g15460 838116 BOR4 (REQUIRES HIGH BORON 4) Encodes a efflux-type boron transporter. Over-expression improved plant growth under B toxic conditions. C.G. S.X.
0.04 2e-2 42 At1g74810 843820 BOR5 F:anion exchanger activity;P:anion transport;C:integral to membrane, membrane;MFPOBV C.G. S.X.
0.08 7e-2 40 At5g25430 832617 anion exchanger F:anion exchanger activity;P:anion transport;C:integral to membrane, membrane;MFPOBV C.G. S.X.
0.01 7e-2 40 At3g56640 824831 exocyst complex subunit Sec15-like family protein F:unknown;P:pollen germination, pollen tube growth;C:exocyst;MFPOA C.G. S.X.
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Orthologous genes

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HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.21 1e-16 89 Glycine max GmaAffx.78135.1.S1_at BM309768 - - 3e-17 At3g62270 anion exchange family protein C.G. S.X.
0.14 2e-6 54 Hordeum vulgare Contig19634_at Contig19634 - - 2e-6 At3g62270 anion exchange family protein C.G. S.X.
0.30 8e-31 137 Oryza sativa Os12g0566000 AK100510.1 - HCO3-transporter domain containing protein 5e-31 At3g62270 anion exchange family protein C.G. S.X.
0.57 3e-54 214 Populus trichocarpa PtpAffx.211693.1.S1_at pmrna22921 anion exchanger family protein - 2e-113 At2g47160 BOR1 (REQUIRES HIGH BORON 1) C.G. S.X.
0.20 6e-21 103 Triticum aestivum Ta.5402.1.S1_at CK152012 - - 7e-21 At3g62270 anion exchange family protein C.G. S.X.
0.01 1e+0 34 Vitis vinifera 1608954_at BQ797110 hypothetical protein LOC100249685 - 2e-36 At5g64816 unknown protein C.G. S.X.
0.34 8e-43 174 Zea mays Zm.13841.1.S1_at AY104076.1 - - 2e-42 At3g62270 anion exchange family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006820 The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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