CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g62150

Gene name PGP21 (P-GLYCOPROTEIN 21)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At3g62150 825388 PGP21 (P-GLYCOPROTEIN 21) F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMAFPV S.X. H.G.
0.60 75.7 At4g21400 827892 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA S.X. H.G.
0.35 41.6 At5g43170 834334 AZF3 (ARABIDOPSIS ZINC-FINGER PROTEIN 3) Encodes zinc finger protein. mRNA levels are elevated in response to high salinity and low temperature. The protein is localized to the nucleus and acts as a transcriptional repressor. S.X. H.G.
0.23 19.3 At1g18570 838438 MYB51 (MYB DOMAIN PROTEIN 51) Encodes a member of the R2R3-MYB transcription family. Involved in indole glucosinolate biosynthesis. S.X. H.G.
0.22 17.5 At1g07135 837224 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;BMPOFVA S.X. H.G.
0.19 12.7 At3g53810 824548 lectin protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA S.X. H.G.
0.14 6.8 At4g30210 829144 ATR2 (ARABIDOPSIS P450 REDUCTASE 2) Encodes NADPH-cytochrome P450 reductase that catalyzes the first oxidative step of the phenylpropanoid general pathway. S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
220.6 100.0 E-MEXP-807-raw-cel-1173272948
94.8 99.9 GSM13784 Cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition
83.7 99.9 E-MEXP-98-raw-cel-320188859
81.2 99.9 E-MEXP-98-raw-cel-320188804
62.4 99.8 E-MEXP-98-raw-cel-320189024
60.4 99.8 GSM13783 Dexamethasone plus cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition
58.8 99.8 GSM142643 MC002_ATH1_A7.3-dubos-wLh GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
58.6 99.8 GSM142646 MC002_ATH1_A8.3-dubos-aih GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
55.6 99.8 GSM13780 Cycloheximide GSE911 Identification of LEAFY targets during reproductive transition
55.2 99.8 E-MEXP-98-raw-cel-320189079
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.68 0 753 At2g47000 819314 ABCB4 (ATP BINDING CASSETTE SUBFAMILY B4) Multidrug resistance P-glycoprotein (MDR/PGP) subfamily of ABC transporters. Functions in the basipetal redirection of auxin from the root tip. Exhibits apolar plasma membrane localization in the root cap and polar localization in tissues above. C.G. S.X.
0.26 1e-35 153 At4g01820 826951 PGP3 (P-GLYCOPROTEIN 3) member of MDR subfamily C.G. S.X.
0.20 3e-30 135 At4g01830 826974 PGP5 (P-GLYCOPROTEIN 5) F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:integral to membrane;BOMAFPV C.G. S.X.
0.34 4e-26 121 At1g02520 839353 PGP11 (P-GLYCOPROTEIN 11) F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMAFPV C.G. S.X.
0.16 2e-19 99 At4g18050 827530 PGP9 (P-GLYCOPROTEIN 9) F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:integral to membrane;BOMAFPV C.G. S.X.
0.29 2e-18 95 At1g02530 839282 PGP12 (P-GLYCOPROTEIN 12) F:ATPase activity, coupled to transmembrane movement of substances;P:response to cyclopentenone;C:integral to membrane;BOMAFPV C.G. S.X.
0.04 1e-17 93 At1g28010 839694 PGP14 (P-GLYCOPROTEIN 14) F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:integral to membrane;BOMAFPV C.G. S.X.
0.04 2e-15 85 At1g27940 839687 PGP13 (P-GLYCOPROTEIN 13) F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:integral to membrane;BOMAFPV C.G. S.X.
0.10 6e-13 77 At5g46540 834697 PGP7 (P-GLYCOPROTEIN 7) F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:integral to membrane;BOMAFPV C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.12 2e-10 69 Glycine max GmaAffx.88118.1.S1_at BE474488 - - 1e-10 At1g02520 PGP11 (P-GLYCOPROTEIN 11) C.G. S.X.
0.01 6e-5 50 Hordeum vulgare Contig19175_at Contig19175 - - 1e-1 At1g10680 PGP10 (P-GLYCOPROTEIN 10) C.G. S.X.
0.13 4e-31 139 Oryza sativa Os01g0290700 AK058263.1 - MDR-like p-glycoprotein 2e-31 At3g62150 PGP21 (P-GLYCOPROTEIN 21) C.G. S.X.
0.24 3e-37 159 Populus trichocarpa PtpAffx.202415.1.S1_at pmrna4851 multidrug/pheromone exporter, MDR family, ABC transporter family - 4e-51 At2g47000 ABCB4 (ATP BINDING CASSETTE SUBFAMILY B4) C.G. S.X.
0.04 2e-3 46 Triticum aestivum Ta.2793.1.S1_at AB055077.1 multidrug resistance protein 1 homolog - 3e-2 At1g02530 PGP12 (P-GLYCOPROTEIN 12) C.G. S.X.
0.11 2e-31 137 Vitis vinifera 1610363_at CB979583 hypothetical protein LOC100267452 - 9e-32 At3g62150 PGP21 (P-GLYCOPROTEIN 21) C.G. S.X.
0.04 2e-1 38 Zea mays Zm.4341.1.S1_at CK985951 hypothetical protein LOC100194270 - 7e-7 At4g01830 PGP5 (P-GLYCOPROTEIN 5) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006810 The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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