Gene omics information

Query gene ID At3g61890
Gene name ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX 12)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8994.6At3g61890825362ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX 12)Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. Loss of function mutant has abnormally shaped leaves and stems.S.X.H.G.
0.8994.6At2g46680819280ATHB-7 (ARABIDOPSIS THALIANA HOMEOBOX 7)encodes a putative transcription factor that contains a homeodomain closely linked to a leucine zipper motif. Transcript is detected in all tissues examined. Is transcriptionally regulated in an ABA-dependent manner and may act in a signal transduction pathway which mediates a drought response.S.X.H.G.
0.8693.1At5g57050835809ABI2 (ABA INSENSITIVE 2)Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo.S.X.H.G.
0.7586.9At2g41190818718amino acid transporter family proteinF:amino acid transmembrane transporter activity;P:amino acid transport;C:plasma membrane, membrane;MPOFBAVS.X.H.G.
0.7385.5At5g59220836040protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:response to water deprivation, response to abscisic acid stimulus;C:chloroplast;MPOFBVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
114.699.9GSM269827C2 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
114.399.9GSM269821WT leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
108.899.9GSM131303AtGen_6-2611_Osmoticstress-Shoots-24.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
105.399.9GSM269813WT leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
102.699.9GSM269819C2 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
76.399.9GSM184914Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
71.399.9GSM131299AtGen_6-2511_Osmoticstress-Shoots-12.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
68.399.9GSM131304AtGen_6-2612_Osmoticstress-Shoots-24.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
66.299.8GSM269829WT leaf-drought-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
62.699.8GSM269823T6 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.332e-45182At2g46680819280ATHB-7 (ARABIDOPSIS THALIANA HOMEOBOX 7)encodes a putative transcription factor that contains a homeodomain closely linked to a leucine zipper motif. Transcript is detected in all tissues examined. Is transcriptionally regulated in an ABA-dependent manner and may act in a signal transduction pathway which mediates a drought response.C.G.S.X.
0.081e-757At1g26960839587AtHB23 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 23)Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.C.G.S.X.
0.016e-342At5g11390831010unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVC.G.S.X.
0.046e-342At1g27050839594ATHB54 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 54)Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.C.G.S.X.
0.032e-240At5g39750833971AGL81 (AGAMOUS-LIKE 81)F:transcription factor activity;P:embryonic development ending in seed dormancy, regulation of transcription, DNA-dependent;C:nucleus;POC.G.S.X.
0.022e-240At3g24860822084hydroxyproline-rich glycoprotein family proteinF:transcription factor activity;P:biological_process unknown;C:chloroplast;POMVFBC.G.S.X.
0.032e-240At2g01760814707ARR14 (ARABIDOPSIS RESPONSE REGULATOR 14)member of Response Regulator: B- TypeC.G.S.X.
0.022e-240At2g36420818216unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.126e-1685Glycine maxGmaAffx.1785.1.S1_atBF325331--3e-24At2g46680ATHB-7 (ARABIDOPSIS THALIANA HOMEOBOX 7)C.G.S.X.
0.041e-240Hordeum vulgareHVSMEc0001C18f2_s_atHVSMEc0001C18f2--7e-1At2g43018CPuORF17 (Conserved peptide upstream open reading frame 17)C.G.S.X.
0.047e-136Oryza sativaOsAffx.8770.1.S1_at---0C.G.S.X.
0.111e-448Populus trichocarpaPtp.3162.1.S1_atCK109623--1e-4At3g61890ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX 12)C.G.S.X.
0.044e-136Triticum aestivumTa.16524.1.S1_atCA607751MADS-box transcription factor TaAGL11-1e-1At3g61890ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX 12)C.G.S.X.
0.062e-652Vitis vinifera1610657_atCB978484hypothetical protein LOC100241332-2e-22At1g69780ATHB13C.G.S.X.
0.044e-238Zea maysZmAffx.760.1.A1_atAI734521--1e+1At5g42591unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009414A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.
XGO:0009737A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.
XGO:0045941Any process that activates or increases the frequency, rate or extent of transcription.
XGO:0006970A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.
XGO:0009651A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
CGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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