Gene omics information

Query gene ID At3g61880
Gene name CYP78A9 (CYTOCHROME P450 78A9)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g61880825361CYP78A9 (CYTOCHROME P450 78A9)Encodes a cytochrome p450 monooxygenase. Overexpression of this gene allows fruit growth independently of fertilization. The gene is normally expressed only in floral organs(during the Arabidopsis stage 14 flower) and in the funiculus at anthesis.S.X.H.G.
0.8994.6At3g04150819570germin-like protein, putativeF:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PFOS.X.H.G.
0.8894.0At3g04170819572germin-like protein, putativeF:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PFBOS.X.H.G.
0.8290.9At3g04180819573germin-like protein, putativeF:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PFOBAS.X.H.G.
0.8089.8At2g41390818737unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.6781.6At1g19900838578glyoxal oxidase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BFPOS.X.H.G.
0.5065.3At4g32290829363unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POBS.X.H.G.
0.4761.2At4g25980828704cationic peroxidase, putativeF:peroxidase activity;P:response to oxidative stress;C:endomembrane system;PFOMS.X.H.G.
0.3541.6At5g07500830642PEI1Encodes an embryo-specific zinc finger transcription factor required for heart-stage embryo formation.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
874.7100.0E-ATMX-1-raw-cel-1112746267
637.7100.0E-ATMX-1-raw-cel-1112746209
212.7100.0GSM131698ATGE_81_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
209.5100.0GSM131697ATGE_81_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
201.4100.0GSM131699ATGE_81_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
195.0100.0E-ATMX-1-raw-cel-1112746154
99.099.9GSM142642MC002_ATH1_A7.2-dubos-wLhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
97.399.9GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
89.899.9GSM142644MC002_ATH1_A8.1-dubos-aihGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
84.099.9GSM131707ATGE_84_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.601e-101371At2g46660819278CYP78A6member of CYP78AC.G.S.X.
0.204e-21103At1g01190839233CYP78A8member of CYP78AC.G.S.X.
0.022e-448At4g12330826842CYP706A7member of CYP706AC.G.S.X.
0.041e-242At1g74110843751CYP78A10member of CYP78AC.G.S.X.
0.051e-242At1g13710837932CYP78A5member of CYP78AC.G.S.X.
0.015e-240At1g62440842542LRX2 (LEUCINE-RICH REPEAT/EXTENSIN 2)encodes a paralog of LRX1 (LEUCINE-RICH REPEAT/EXTENSIN 1) which acts synergistically with LRX1 in root hair cell morphogenesis.C.G.S.X.
0.018e-136At5g45980834638WOX8 (WUSCHEL RELATED HOMEOBOX 8)Arabidopsis thaliana WOX8 protein. Contains similarity to homeodomain transcription factor. Positively regulates early embryonic growth.C.G.S.X.
0.008e-136At5g53460835427GLT1NADH-dependent glutamate synthaseC.G.S.X.
0.028e-136At3g56010824767unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast thylakoid membrane;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.166e-1893Glycine maxGma.138.1.S1_atAF022463.1--4e-18At3g61880CYP78A9 (CYTOCHROME P450 78A9)C.G.S.X.
0.041e-448Hordeum vulgareContig15786_atContig15786--1e-4At3g61880CYP78A9 (CYTOCHROME P450 78A9)C.G.S.X.
0.084e-448Oryza sativaOs11g0487600CB618435-Cytochrome P450 family protein1e-4At3g61880CYP78A9 (CYTOCHROME P450 78A9)C.G.S.X.
0.313e-1997Populus trichocarpaPtp.5520.1.S1_atCK099052cytochrome P450-2e-19At3g61880CYP78A9 (CYTOCHROME P450 78A9)C.G.S.X.
0.028e-136Triticum aestivumTaAffx.111067.1.S1_x_atCA650713--4e+0At2g42130unknown proteinC.G.S.X.
0.057e-1167Vitis vinifera1607719_atBQ799914hypothetical protein LOC100253660-3e-10At3g61880CYP78A9 (CYTOCHROME P450 78A9)C.G.S.X.
0.022e-240Zea maysZm.6421.1.A1_atAI834083--1e-9At2g46380unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0010154The process whose specific outcome is the progression of the fruit over time, from its formation to the mature structure. The fruit is a reproductive body of a seed plant.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00347Link to KaPPA-View 4Cytochrome P450



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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