Gene omics information

Query gene ID At3g61410
Gene name -
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At3g61410825313-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOS.X.H.G.
0.5974.7At1g74770843816protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOFVBS.X.H.G.
0.4457.2At3g58810825050MTPA2 (METAL TOLERANCE PROTEIN A2)Member of Zinc transporter (ZAT) family. Contributes to basic cellular Zn tolerance and controls Zn partitioning, particularly under conditions of high rates of Zn influx into the root symplasm. Localizes to the vacuolar membrane.S.X.H.G.
0.3338.1At4g09110826489zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:endomembrane system;PMOFVBS.X.H.G.
0.3338.1At4g10510826643subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:unknown;BPOAFMS.X.H.G.
0.2930.3At5g03570831787ATIREG2 (IRON-REGULATED PROTEIN 2)Encodes a tonoplast localized nickel transport protein.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
277.9100.0GSM205432Col_ leaf_ wildtype_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
132.699.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
130.299.9GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
126.099.9GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
120.999.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
119.399.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
115.999.9GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
111.699.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
110.099.9GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
109.099.9GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.063e-550At2g45910819199protein kinase family protein / U-box domain-containing proteinF:ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, protein ubiquitination;C:ubiquitin ligase complex;MPOBFVAC.G.S.X.
0.067e-342At2g45920819200U-box domain-containing proteinF:ubiquitin-protein ligase activity;P:protein ubiquitination;C:ubiquitin ligase complex;POMFBAVC.G.S.X.
0.023e-240At5g02600831874heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:chloroplast;POMFVBC.G.S.X.
0.023e-240At5g01490831754CAX4 (CATION EXCHANGER 4)Encodes a cation/proton antiporter, a member of Low affinity calcium antiporter CAX2 family.C.G.S.X.
0.033e-240At4g05620825934F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.031e-138At5g14690831321unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PVMC.G.S.X.
0.021e-138At4g15755827254C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFMOC.G.S.X.
0.021e-138At4g14680827118APS3ATP sulfurylaseC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-138Glycine maxGmaAffx.77908.1.S1_atBG650814--3e-1At5g28630glycine-rich proteinC.G.S.X.
0.032e-136Hordeum vulgareContig25984_atContig25984--9e-1At4g24380unknown proteinC.G.S.X.
0.036e-240Oryza sativaOsAffx.25287.1.S1_at---0C.G.S.X.
0.032e-138Populus trichocarpaPtp.5257.1.S1_atBU887190hypothetical protein-1e-15At5g66470GTP binding / RNA bindingC.G.S.X.
0.031e-138Triticum aestivumTaAffx.113094.1.S1_atCA618111--2e-1At4g32030unknown proteinC.G.S.X.
0.031e-136Vitis vinifera1622490_atCF208094hypothetical protein LOC100262793-6e-1At1g68490unknown proteinC.G.S.X.
0.022e-136Zea maysZm.17207.1.A1_atCK370357hypothetical protein LOC100192477-1e-4At5g14850mannosyltransferase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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