Gene omics information

Query gene ID At3g61310
Gene name DNA-binding family protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5065.3At3g61310825303DNA-binding family proteinF:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMFOBS.X.H.G.
0.6781.6At1g67040843024unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFS.X.H.G.
0.5773.8At4g29030829024glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVAS.X.H.G.
0.5773.8At5g08000830694E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3)Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and binds callose.S.X.H.G.
0.4050.8At2g26330817173ER (ERECTA)Homologous to receptor protein kinases. Involved in specification of organs originating from the shoot apical meristem. Contains a cytoplasmic protein kinase catalytic domain, a transmembrane region, and an extracellular leucine-rich repeat. ER has been identified as a quantitative trait locus for transpiration efficiency by influencing epidermal and mesophyll development, stomatal density and porosity of leaves. It has been implicated in resistance to the bacterium Ralstonia solanacearum and to the necrotrophic fungus Plectosphaerella cucumerina. Together with ERL1 and ERL2, ER governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
35.299.7GSM131671ATGE_48_BGSE5633AtGenExpress: Developmental series (shoots and stems)
34.899.7GSM131678ATGE_50_CGSE5633AtGenExpress: Developmental series (shoots and stems)
33.999.7GSM131683ATGE_52_BGSE5633AtGenExpress: Developmental series (shoots and stems)
31.899.7GSM131675ATGE_49_CGSE5633AtGenExpress: Developmental series (shoots and stems)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.398e-34145At2g45850819193DNA-binding family proteinF:DNA binding;P:biological_process unknown;C:nucleus;PMFOBC.G.S.X.
0.039e-342At3g22070821769proline-rich family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MOBPFVAC.G.S.X.
0.023e-240At5g51590835233DNA-binding protein-relatedF:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMFOVBC.G.S.X.
0.021e-138At5g03940830273CPSRP54 (CHLOROPLAST SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT)mutant has Yellow first leaves; Chloroplast Signal Recognition Particle SubunitC.G.S.X.
0.021e-138At4g35480829700RHA3BEncodes a putative RING-H2 finger protein RHA3b.C.G.S.X.
0.041e-138At4g17950827520DNA-binding family proteinF:DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;OMFPBVC.G.S.X.
0.021e-138At3g43520823438unknown proteinF:unknown;P:biological_process unknown;C:chloroplast, chloroplast envelope;MPBOFVAC.G.S.X.
0.011e-138At1g21630838765calcium-binding EF hand family proteinF:calcium ion binding;P:unknown;C:cytosol, plasma membrane;BMOFPVAC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.063e-344Glycine maxGmaAffx.87594.1.S1_atAW472032--2e-3At3g61310DNA-binding family proteinC.G.S.X.
0.023e-136Hordeum vulgareContig18837_atContig18837--3e-4At5g60020LAC17 (laccase 17)C.G.S.X.
0.032e-242Oryza sativaOs05g0227600AY224438.1-Conserved hypothetical protein3e-6At2g24060translation initiation factor 3 (IF-3) family proteinC.G.S.X.
0.105e-550Populus trichocarpaPtpAffx.61338.1.S1_atDN484218hypothetical protein-3e-5At3g61310DNA-binding family proteinC.G.S.X.
0.036e-136Triticum aestivumTaAffx.30889.1.S1_atCA621330--3e-1At1g08480unknown proteinC.G.S.X.
0.064e-1167Vitis vinifera1608738_atBQ800272hypothetical protein LOC100265498-8e-11At3g61310DNA-binding family proteinC.G.S.X.
0.022e-136Zea maysZm.705.1.S1_atBG842406--4e-2At1g04445zinc finger (C2H2 type) family proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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