Gene omics information

Query gene ID At3g61130
Gene name GAUT1 (GALACTURONOSYLTRANSFERASE 1)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g61130825285GAUT1 (GALACTURONOSYLTRANSFERASE 1)Encodes a protein with putative galacturonosyltransferase activity.S.X.H.G.
0.4862.5At1g08200837341AXS2 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2)Encodes a putative UDP-D-apiose/UPD-D-xylose synthetase.S.X.H.G.
0.4761.2At4g18030827528dehydration-responsive family proteinF:unknown;P:biological_process unknown;C:Golgi apparatus, plasma membrane, plant-type cell wall;PBOS.X.H.G.
0.4659.8At5g11710831043epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedEPSIN1 plays an important role in the vacuolar trafficking of soluble proteins at the trans-Golgi network via its interaction with gamma-ADR, VTI11, VSR1, and clathrin. Associated with actin filaments and with the Golgi complex. Expressed in most tissues.S.X.H.G.
0.3948.4At1g67930843121Golgi transport complex protein-relatedF:unknown;P:unknown;C:chloroplast;OMFBPVS.X.H.G.
0.3846.7At4g38040829960exostosin family proteinF:catalytic activity;P:biological_process unknown;C:chloroplast, membrane;PMOBFVS.X.H.G.
0.3846.7At5g08530830752CI51 (51 kDa subunit of complex I)F:4 iron, 4 sulfur cluster binding, NAD or NADH binding, FMN binding, NADH dehydrogenase (ubiquinone) activity, oxidoreductase activity, acting on NADH or NADPH;P:mitochondrial electron transport, NADH to ubiquinone;C:mitochondrion, respiratory chain complex I;OBMFPAS.X.H.G.
0.3541.6At4g18060827531clathrin bindingF:clathrin binding;P:unknown;C:unknown;MOFPBS.X.H.G.
0.2930.3At1g26850839229dehydration-responsive family proteinF:unknown;P:unknown;C:Golgi apparatus, membrane;PBOS.X.H.G.
0.2830.3At1g25490839135RCN1 (ROOTS CURL IN NPA)One of three genes encoding phosphoprotein phosphatase 2A regulatory subunit A; Recessive ethylene-response mutant EER1 displays increased ethylene sensitivity in the hypocotyl and stemS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
17.499.5GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
15.299.4GSM133961Fukuda_1-6_4B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
13.699.4GSM133963Fukuda_1-8_6B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
13.399.4GSM133966Fukuda_1-11_10A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
12.399.3GSM133962Fukuda_1-7_6A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
11.899.3GSM133960Fukuda_1-5_4A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
11.399.3GSM133964Fukuda_1-9_8A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
11.299.2GSM133965Fukuda_1-10_8B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
10.199.2GSM133967Fukuda_1-12_10B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
9.099.1E-TABM-61-raw-cel-683343592
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.111e-1585At2g46480819257GAUT2Encodes a protein with putative galacturonosyltransferase activity.C.G.S.X.
0.085e-1583At4g38270829984GAUT3 (Galacturonosyltransferase 3)Encodes a protein with putative galacturonosyltransferase activity.C.G.S.X.
0.034e-344At5g54690835558GAUT12 (GALACTURONOSYLTRANSFERASE 12)Encodes a protein with putative galacturonosyltransferase activity. Mutants defective in this gene displayed a notable reduction in xylose (>50%) in the cell walls from stems and roots and a reduction in cellulose (~25%).C.G.S.X.
0.016e-240At2g38650818447GAUT7 (GALACTURONOSYLTRANSFERASE 7)F:polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:Golgi apparatus;PBMFOVC.G.S.X.
0.016e-240At2g31830817740endonuclease/exonuclease/phosphatase family proteinF:inositol or phosphatidylinositol phosphatase activity;P:unknown;C:unknown;MFPOBC.G.S.X.
0.013e-138At3g15170820748CUC1 (CUP-SHAPED COTYLEDON1)Encodes a transcription factor involved in shoot apical meristem formation and auxin-mediated lateral root formation. The gene is thought not to be involved in stress responses (NaCl, auxins, ethylene). Cuc mutant was first recognized at the heart stage, where embryos lacking two distinct bulges of cotyledonary primordia were observed.C.G.S.X.
0.033e-138At3g25140822105QUA1 (QUASIMODO 1)Quasimodo1, encodes a glycosyltransferase, involved in homogalacturonan biosynthesis; mutant shows cell adhesion defect and lower wall uronic acid content.C.G.S.X.
0.041e+036At5g47780834829GAUT4 (Galacturonosyltransferase 4)Encodes a protein with putative galacturonosyltransferase activity.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.241e-31139Glycine maxGmaAffx.79679.1.S1_atBG155341--3e-32At3g61130GAUT1 (GALACTURONOSYLTRANSFERASE 1)C.G.S.X.
0.322e-34147Hordeum vulgareContig7832_atContig7832--5e-34At3g61130GAUT1 (GALACTURONOSYLTRANSFERASE 1)C.G.S.X.
0.283e-24115Oryza sativaOs06g0712500AK068531.1-Glycosyl transferase, family 8 protein2e-24At3g61130GAUT1 (GALACTURONOSYLTRANSFERASE 1)C.G.S.X.
0.125e-25117Populus trichocarpaPtp.7877.1.A1_atCV261347glycosyltransferase-1e-25At3g61130GAUT1 (GALACTURONOSYLTRANSFERASE 1)C.G.S.X.
0.125e-1273Triticum aestivumTa.3672.1.S1_s_atBJ292063--1e-12At3g61130GAUT1 (GALACTURONOSYLTRANSFERASE 1)C.G.S.X.
0.106e-24111Vitis vinifera1608107_atCB977040similar to GAUT1/LGT1 (Galacturonosyltransferase 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups-1e-23At3g61130GAUT1 (GALACTURONOSYLTRANSFERASE 1)C.G.S.X.
0.266e-31135Zea maysZm.13469.1.S1_atAY109041.1hypothetical protein LOC100191781-2e-30At3g61130GAUT1 (GALACTURONOSYLTRANSFERASE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0010289The chemical reactions and pathways resulting in the formation of the pectidic homogalacturonan, characterized by a backbone of 1,4-linked alpha-D-GalpA residues that can be methyl-esterified at C-6 and carry acetyl groups on O-2 and O-3.
CGO:0016051The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00359Link to KaPPA-View 4Glucosyltransferase
00437Link to KaPPA-View 4Xyloglucan biosynthesis and modification



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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