Gene omics information

Query gene ID At3g60270
Gene name uclacyanin, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6176.7At3g60270825198uclacyanin, putativeF:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;POBVFMAS.X.H.G.
0.7586.9At5g26130832682-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBS.X.H.G.
0.6781.6At3g29410822602terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;POS.X.H.G.
0.5773.8At4g08380826395proline-rich extensin-like family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPFOBVAS.X.H.G.
0.2420.7At3g05950819765germin-like protein, putativeF:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PFBOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
386.9100.0GSM142724CH001_ATH1_A003-Hampt-c4a_repeatGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
379.4100.0GSM142723CH001_ATH1_A002-Hampt-akaGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
372.7100.0GSM142730CH001_ATH1_A009-Hampt-wsc_repeatGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
356.1100.0GSM142728CH001_ATH1_A007-Hampt-c4bGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
252.1100.0GSM142725CH001_ATH1_A004-Hampt-c1aGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
233.4100.0GSM142721CH001_ATH1_A001-Hampt-wsaGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
207.1100.0GSM142729CH001_ATH1_A008-Hampt-c1bGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
175.0100.0GSM157323Hammond_3-16_Control-root_Rep3_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plants
174.5100.0GSM142726CH001_ATH1_A005-Hampt-wsb_repeatGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
165.6100.0GSM157327Hammond_3-11_Potassium-starved-root_Rep2_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plants
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.491e-34147At3g60280825199UCC3 (UCLACYANIN 3)Encodes blue copper-binding protein III.C.G.S.X.
0.141e-1273At2g44790819088UCC2 (UCLACYANIN 2)Encodes a uclacyanin, a protein precursor that is closely related to precursors of stellacyanins and a blue copper protein from pea pods.C.G.S.X.
0.021e+034At5g39550833951VIM3 (VARIANT IN METHYLATION 3)Encodes the VIM3/ORTH1 protein that is similar to VIM1. This protein has an N-terminal PHD domain and two RING domains surrounding an SRA domain. The protein has been shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the former. This protein functions as an E3 ubiquitin ligase in vitro with members of the UBC8 family E2s. Either of the two RING domains present in the protein can promote ubiquitylation in vitro, but, not the PHD domain. Over-expression of ORTH1/VIM3 leads to decreased levels of FWA methylation, increased levels of FWA transcripts, and delayed flowering. Cen180 repeats are also hypomethylated in plants overexpressing this protein.C.G.S.X.
0.041e+034At3g46300823775unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.041e+034At3g03000821161calmodulin, putativeCalmodulin like protein localized in the plant vacuolar compartment with a function of binding and modifying the activity of a tonoplast transporter (AtNHX1) from within the vacuole in a Ca+2- and pH-dependent mannerC.G.S.X.
0.021e+034At2g35210818088RPA (ROOT AND POLLEN ARFGAP)A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.C.G.S.X.
0.021e+034At2g40210818613AGL48 (AGAMOUS-LIKE 48)F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PFOMC.G.S.X.
0.011e+034At2g20210816540leucine-rich repeat family proteinF:protein binding;P:unknown;C:endomembrane system;MOPBFC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Glycine maxPsAffx.C87000029_s_atPsAffx.C87000029--5e+0At5g33390glycine-rich proteinC.G.S.X.
0.042e+032Hordeum vulgareHVSMEm0012J18r2_atHVSMEm0012J18r2--3e-1At3g03000calmodulin, putativeC.G.S.X.
0.024e-240Oryza sativaOs01g0339500AK066107.1-Conserved hypothetical protein6e-2At3g60270uclacyanin, putativeC.G.S.X.
0.046e+032Populus trichocarpaPtpAffx.43824.2.A1_atCK088998--7e+0At5g53610glycosyl hydrolase family protein 17C.G.S.X.
0.042e-240Triticum aestivumTaAffx.63965.1.A1_atBJ262499--3e-1At5g51812unknown proteinC.G.S.X.
0.031e+032Vitis vinifera1610747_atCB004428--8e-2At4g01250WRKY22C.G.S.X.
0.032e+032Zea maysZm.13983.1.S1_atAY106294.1hypothetical protein LOC100193701-3e-2At2g31985unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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