Gene omics information

Query gene ID At3g59790
Gene name ATMPK10
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g59790825148ATMPK10member of MAP KinaseS.X.H.G.
1.00100.0At1g33220840216beta-1,3-glucanase, putativeF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;POS.X.H.G.
1.00100.0At2g120503768039-F:unknown;P:unknown;C:unknownS.X.H.G.
1.00100.0At3g56530824820anac064 (Arabidopsis NAC domain containing protein 64)F:transcription factor activity;P:regulation of transcription;C:unknown;PS.X.H.G.
1.00100.0At5g07700830663MYB76 (myb domain protein 76)Encodes a putative transcription factor (MYB76).S.X.H.G.
0.9296.0At5g20370832159serine-rich protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7184.2At1g67210843041proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family proteinF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPOFVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3181.4100.0GSM133773Lindsey_1-25_torpedo-meristem_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
216.5100.0GSM133768Lindsey_1-20_torpedo-basal_Rep5_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
126.699.9GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
122.099.9GSM133774Lindsey_1-26_torpedo-meristem_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
101.699.9GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
76.899.9GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
37.099.7GSM176876AWP_AL_Txed_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
31.399.7GSM184497Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
29.499.7GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
26.599.7GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.492e-74280At2g43790818982ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6)Encodes a MAP kinase induced by pathogens, ethylene biosynthesis, oxidative stress and osmotic stress.Also involved in ovule development. Homozygous mutants in a MPK3 heterozygous background are female sterile due to defects in integument development.C.G.S.X.
0.142e-1997At3g45640823706ATMPK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE 3)Encodes a mitogen-activated kinase whose mRNA levels increase in response to touch, cold, salinity stress and chitin oligomers.Also functions in ovule development. Heterozygous MPK3 mutants in a homozygous MPK6 background are female sterile due to defects in integument development. MPK3 can be dephosphorylated by MKP2 in vitro.C.G.S.X.
0.104e-1169At1g07880837303ATMPK13member of MAP KinaseC.G.S.X.
0.032e-448At1g59580842248ATMPK2 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE HOMOLOG 2)encodes a mitogen-activated kinase involved in innate immunityC.G.S.X.
0.066e-446At4g36450829797ATMPK14 (Mitogen-activated protein kinase 14)member of MAP KinaseC.G.S.X.
0.026e-446At3g14720820700ATMPK19member of MAP KinaseC.G.S.X.
0.056e-446At2g18170816330ATMPK7 (ARABIDOPSIS THALIANA MAP KINASE 7)F:MAP kinase activity, kinase activity;P:signal transduction, response to hydrogen peroxide, circadian rhythm;C:unknown;MOPFBVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.191e-33145Glycine maxGma.4214.1.S1_atCD418435mitogen-activated protein kinase 2-5e-70At2g43790ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6)C.G.S.X.
0.161e-1893Hordeum vulgareContig7661_atContig7661--2e-53At2g43790ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6)C.G.S.X.
0.123e-1377Oryza sativaOs06g0154500AK111691.1-Mitogen-activated protein kinase (MAP kinase 6)5e-36At2g43790ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6)C.G.S.X.
0.166e-859Populus trichocarpaPtpAffx.10664.1.S1_s_atCV244216hypothetical protein-3e-86At2g43790ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6)C.G.S.X.
0.133e-1583Triticum aestivumTa.23916.1.S2_s_atAY173962.1Mitogen-activated protein kinase-1e-52At2g43790ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6)C.G.S.X.
0.047e-444Vitis vinifera1610061_atCB982096--5e-49At2g43790ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6)C.G.S.X.
0.135e-1271Zea maysZm.218.2.A1_atCF634511ABA stimulation MAP kinase-2e-31At2g43790ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0007165The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
04650Link to KEGG PATHWAYNatural killer cell mediated cytotoxicity
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