CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g59700

Gene name ATHLECRK (ARABIDOPSIS THALIANA LECTIN-RECEPTOR KINASE)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.25 22.6 At3g59700 825139 ATHLECRK (ARABIDOPSIS THALIANA LECTIN-RECEPTOR KINASE) member of Receptor kinase-like protein family S.X. H.G.
0.23 19.3 At4g23190 828418 CRK11 (CYSTEINE-RICH RLK11) Encodes putative receptor-like protein kinase that is induced by the soil-borne vascular bacteria, Ralstonia solanacearum. Naming convention from Chen et al 2003 (PMID 14756307) S.X. H.G.
0.19 12.7 At4g31550 829282 WRKY11 member of WRKY Transcription Factor; Group II-d; negative regulator of basal resistance to Pseudomonas syringae. S.X. H.G.
0.08 2.3 At2g26530 817194 AR781 unknown function S.X. H.G.
0.06 1.4 At5g46780 834721 VQ motif-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOBV S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
189.7 100.0 E-MEXP-807-raw-cel-1173272948
85.6 99.9 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
77.3 99.9 GSM143306 High_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
66.1 99.8 GSM39213 RRE2_Chitin3 GSE2169 rre1 and rre2 mutants
65.4 99.8 E-MEXP-1094-raw-cel-1379507273
63.3 99.8 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
62.9 99.8 E-MEXP-1094-raw-cel-1379507313
62.2 99.8 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
57.3 99.8 E-MEXP-807-raw-cel-1173273170
57.0 99.8 GSM253647 Col-0 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.66 0 1241 At3g59750 825144 receptor lectin kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.72 0 1180 At3g59740 825143 receptor lectin kinase 3 (lecRK3) F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.60 0 934 At3g59730 825142 receptor lectin kinase, putative F:carbohydrate binding, kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.33 4e-46 186 At2g43700 818972 lectin protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.35 8e-26 119 At2g43690 818971 lectin protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.09 2e-23 111 At1g70130 843349 lectin protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.11 3e-16 87 At4g29050 829026 lectin protein kinase family protein F:carbohydrate binding, kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.11 2e-14 81 At1g70110 843347 lectin protein kinase family protein F:carbohydrate binding, kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.02 2e-5 52 At2g39360 818521 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e-3 46 Glycine max GmaAffx.66617.1.S1_at BU760718 - - 5e-33 At1g28440 HSL1 (HAESA-Like 1) C.G. S.X.
0.02 2e+0 34 Hordeum vulgare Contig13755_at Contig13755 - - 2e+0 At4g02420 lectin protein kinase, putative C.G. S.X.
0.03 6e-10 67 Oryza sativa Os07g0130800 AK067638.1 - - 5e-10 At3g59700 ATHLECRK (ARABIDOPSIS THALIANA LECTIN-RECEPTOR KINASE) C.G. S.X.
0.05 9e-2 40 Populus trichocarpa PtpAffx.224444.1.S1_s_at pmrna42994 hypothetical protein - 2e-8 At5g59270 lectin protein kinase family protein C.G. S.X.
0.03 2e-2 42 Triticum aestivum TaAffx.50267.1.S1_at CA743569 - - 5e-5 At2g37710 RLK (receptor lectin kinase) C.G. S.X.
0.02 1e+0 34 Vitis vinifera 1612640_at AY427142.1 - - 2e-8 At2g37710 RLK (receptor lectin kinase) C.G. S.X.
0.01 1e-1 38 Zea mays Zm.5558.2.S1_at AY104378.1 - - 4e-34 At4g14350 protein kinase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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