Gene omics information

Query gene ID At3g59340
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4558.3At3g59340825103unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;OMBFPAS.X.H.G.
0.7385.5At5g06630830551proline-rich extensin-like family proteinF:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MFPOBVAS.X.H.G.
0.7184.2At5g19800832100hydroxyproline-rich glycoprotein family proteinF:unknown;P:biological_process unknown;C:endomembrane system;MPOFBVAS.X.H.G.
0.7184.2At4g25220828625transporter, putativeF:transporter activity;P:transport;C:unknown;BOFMAPS.X.H.G.
0.7083.5At2g25240817062serine-type endopeptidase inhibitorF:serine-type endopeptidase inhibitor activity;P:biological_process unknown;C:cellular_component unknown;MVBPOAFS.X.H.G.
0.6982.9At3g54590824624ATHRGP1 (HYDROXYPROLINE-RICH GLYCOPROTEIN)Encodes a hydroxyproline-rich glycoprotein.S.X.H.G.
0.6982.9At5g19790832099RAP2.11 (related to AP2 11)encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.S.X.H.G.
0.6882.2At2g24980817037proline-rich extensin-like family proteinF:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MFPOBVAS.X.H.G.
0.6882.2At5g06640830552proline-rich extensin-like family proteinF:structural constituent of cell wall;P:plant-type cell wall organization;C:unknown;MFPOBVAS.X.H.G.
0.6579.6At3g60280825199UCC3 (UCLACYANIN 3)Encodes blue copper-binding protein III.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
175.3100.0GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
142.699.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
134.099.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
121.399.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
118.199.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
104.899.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
103.399.9GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
95.999.9GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
93.999.9GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
93.599.9GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.730712At3g59310825100unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBAC.G.S.X.
0.601e-106387At3g59320825101integral membrane protein, putativeF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, membrane;OBMPFAC.G.S.X.
0.351e-47190At3g59330825102anthocyanin-related membrane protein familyF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOBC.G.S.X.
0.015e-136At3g24715822069ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVAC.G.S.X.
0.012e+034At4g14180827058AtPRD1 (Arabidopsis thaliana Putative Recombination initiation Defect 1)Encodes a protein that is involved in meiotic recombination and is required for meiotic double strand break repair.C.G.S.X.
0.012e+034At3g55950824761CCR3 (ARABIDOPSIS THALIANA CRINKLY4 RELATED 3)F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.082e-138Glycine maxGmaAffx.64064.1.S1_atAW831824--3e-7At3g59310unknown proteinC.G.S.X.
0.024e+032Hordeum vulgareContig6025_atContig6025--6e-2At4g28610PHR1 (PHOSPHATE STARVATION RESPONSE 1)C.G.S.X.
0.112e-552Oryza sativaOsAffx.30129.1.S1_at---0C.G.S.X.
0.351e-1171Populus trichocarpaPtpAffx.211863.1.S1_atpmrna23283hypothetical protein-6e-31At3g59310unknown proteinC.G.S.X.
0.022e+034Triticum aestivumTa.22094.2.A1_atBG907426--3e+0At3g16640TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN)C.G.S.X.
0.022e+032Vitis vinifera1610579_atCF404677--3e+0At4g11760LCR17 (Low-molecular-weight cysteine-rich 17)C.G.S.X.
0.038e-134Zea maysZm.19309.1.A1_atBM074583solute carrier family 35, member F1-2e+0At3g59320integral membrane protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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