Gene omics information

Query gene ID At3g59100
Gene name ATGSL11 (glucan synthase-like 11)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g59100825079ATGSL11 (glucan synthase-like 11)encodes a protein similar to callose synthaseS.X.H.G.
0.071.9At1g67720843097leucine-rich repeat family protein / protein kinase family proteinF:protein binding, protein kinase activity, kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
0.061.4At3g61960825369protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOFBVAS.X.H.G.
0.051.1At4g11670826772-F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;POMFS.X.H.G.
0.030.6At2g35630818131MOR1 (MICROTUBULE ORGANIZATION 1)Member of the MAP215 family of microtubule-associated proteins required to establish interphase arrays of cortical microtubules.Mutants have defects in cytokinesis during pollen development. Vegetative phenotypes observed in temperature sensitive mutants include left-handed organ twisting, isotropic cell expansion and impairment of root hair polarity.S.X.H.G.
0.020.4At5g20930832217TSL (TOUSLED)Nuclear serine/threonine protein kinase that requires a coiled-coil region for oligomerization and catalytic activity. Required for leaf and flower development. Expression localized to the developing style by stage 13.S.X.H.G.
0.020.4At5g20610832183unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;OMPBFAVS.X.H.G.
0.010.2At2g28810817430Dof-type zinc finger domain-containing proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;POMFBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
186.1100.0GSM311294Laser capture microdissected (LCM) chalazal seed coat at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
105.299.9GSM284395Arabidopsis GPSc1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
95.299.9GSM284396Arabidopsis GPSc2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
92.999.9GSM311282Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
75.799.9GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
47.799.8GSM311281Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
39.399.8GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
38.999.8GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
35.899.7GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
29.099.7GSM133945Murray_2-1_T0-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studies
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.414e-52208At1g06490837160ATGSL07 (glucan synthase-like 7)encodes a gene similar to callose synthaseC.G.S.X.
0.111e-1793At5g13000831140ATGSL12 (glucan synthase-like 12)encodes a gene similar to callose synthaseC.G.S.X.
0.049e-1377At2g36850818258GSL8 (GLUCAN SYNTHASE-LIKE 8)Encodes GSL8, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL8 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. Also refer to GSL10 (At3g07160).C.G.S.X.
0.078e-1067At1g05570837059CALS1 (CALLOSE SYNTHASE 1)Encodes a callose synthase 1 catalytic subunit . Member of Glycosyltransferase Family- 48.C.G.S.X.
0.071e-863At3g14570820683ATGSL04 (glucan synthase-like 4)encodes a protein similar to callose synthaseC.G.S.X.
0.061e-863At2g13680815852CALS5 (CALLOSE SYNTHASE 5)Responsible for the synthesis of callose deposited at the primary cell wall of meiocytes, tetrads and microspores. Required for exine formation during microgametogenesis and for pollen viability. Highest expression in meiocytes, tetrads, microspores and mature pollen.C.G.S.X.
0.085e-861At2g31960817755ATGSL03 (GLUCAN SYNTHASE-LIKE 3)encodes a protein similar to callose synthaseC.G.S.X.
0.043e-656At5g36870833654ATGSL09 (glucan synthase-like 9)encodes a gene similar to callose synthaseC.G.S.X.
0.031e-554At3g07160819903ATGSL10 (glucan synthase-like 10)Encodes GSL10, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL10 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. GSL10 mutation leads to perturbation of microspore division symmetry, irregular callose deposition and failure of generative cell engulfment by the vegetative cell cytoplasm. Also refer to GSL8 (At2g36850).C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-863Glycine maxGmaAffx.65605.1.S1_atBQ299642--6e-15At1g06490ATGSL07 (glucan synthase-like 7)C.G.S.X.
0.062e-656Hordeum vulgareContig4949_atContig4949--3e-53At5g13000ATGSL12 (glucan synthase-like 12)C.G.S.X.
0.107e-1585Oryza sativaOs03g0128100AK105008.2-Glycosyl transferase, family 48 protein3e-35At5g13000ATGSL12 (glucan synthase-like 12)C.G.S.X.
0.372e-76289Populus trichocarpaPtpAffx.205663.1.S1_atpmrna11179hypothetical protein-1e-76At3g59100ATGSL11 (glucan synthase-like 11)C.G.S.X.
0.021e-244Triticum aestivumTaAffx.6587.1.S1_atCA682267--7e-2At3g07160ATGSL10 (glucan synthase-like 10)C.G.S.X.
0.012e-861Vitis vinifera1613862_atCF211656hypothetical protein LOC100256340-7e-48At5g13000ATGSL12 (glucan synthase-like 12)C.G.S.X.
0.066e-963Zea maysZm.13598.1.A1_atAY107727.1--2e-27At5g13000ATGSL12 (glucan synthase-like 12)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006075The chemical reactions and pathways resulting in the formation of beta-1,3 glucans, compounds composed of glucose residues linked by 1,3-beta-D-glucosidic bonds.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00358Link to KaPPA-View 4Callose/glucan biosynthesis
00359Link to KaPPA-View 4Glucosyltransferase



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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