Gene omics information

Query gene ID At3g58610
Gene name ketol-acid reductoisomerase
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g58610825030ketol-acid reductoisomeraseF:coenzyme binding, oxidoreductase activity, binding, ketol-acid reductoisomerase activity, catalytic activity;P:response to cadmium ion, branched chain family amino acid biosynthetic process;C:in 6 components;BOFAPS.X.H.G.
0.6176.7At5g0287083175660S ribosomal protein L4/L1 (RPL4D)F:structural constituent of ribosome;P:translation;C:in 8 components;MOAFPBS.X.H.G.
0.5469.5At5g1520083137240S ribosomal protein S9 (RPS9B)F:structural constituent of ribosome;P:translation;C:in 7 components;POMBFAS.X.H.G.
0.5368.6At3g0963082012060S ribosomal protein L4/L1 (RPL4A)F:structural constituent of ribosome;P:translation;C:in 9 components;MOAFPBS.X.H.G.
0.5267.4At3g0920082007660S acidic ribosomal protein P0 (RPP0B)F:structural constituent of ribosome;P:translational elongation, response to salt stress, response to cold, translation;C:in 7 components;MOAFPBS.X.H.G.
0.5065.3At1g18080838388ATARCAEncodes the Arabidopsis thaliana homolog of the tobacco WD-40 repeat ArcA gene.S.X.H.G.
0.5065.3At1g72370843569P40acidic protein associated to 40S ribosomal subunit of ribosomes. Involved in polysome formation during active protein synthesis. Expressed in actively growing tissue.S.X.H.G.
0.5065.3At2g4184081878440S ribosomal protein S2 (RPS2C)F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane;BOMFPAVS.X.H.G.
0.4862.5At2g0125081465260S ribosomal protein L7 (RPL7B)F:structural constituent of ribosome, transcription regulator activity;P:translation;C:in 8 components;MOFAPS.X.H.G.
0.4862.5At1g14810838046semialdehyde dehydrogenase family proteinencodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesisS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.898.7GSM184528Stele root cells 2hr continuous KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
6.898.7GSM133977Birnbaum_1-7_StageI-4_Rep4_ATH1GSE5749A gene expression map of the Arabidopsis root
6.198.5GSM184525Stele root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
5.498.3GSM184530Stele root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
5.498.3GSM265426Arabidopsis, root, longitudinal zone 1, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
5.098.1GSM133976Birnbaum_1-6_StageI-3_Rep3_ATH1GSE5749A gene expression map of the Arabidopsis root
4.998.1GSM133718Urwin_A-2-Urwin-Inf_SLDGSE5724Plant gene expression associated with susceptibility to nematodes
4.998.1E-MEXP-791-raw-cel-1122937452
4.697.9GSM184527Stele root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
4.597.8GSM184488Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.012e-138At2g34930818058disease resistance family proteinF:protein binding;P:signal transduction, defense response to fungus, defense response;C:cell wall;PMOBFAVC.G.S.X.
0.022e-138At1g77765844113unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.019e-136At5g53870835468plastocyanin-like domain-containing proteinF:electron carrier activity, copper ion binding;P:unknown;C:plasma membrane, anchored to membrane;MFOBPVAC.G.S.X.
0.019e-136At5g57390835845AIL5 (AINTEGUMENTA-LIKE 5)Encodes a member of the AP2 family of transcriptional regulators.May be involved in germination and seedling growth. Mutants are resistant to ABA analogs and are resistant to high nitrogen concentrations.C.G.S.X.
0.019e-136At5g57130835819protein bindingF:protein binding;P:protein metabolic process;C:cellular_component unknown;PBOAMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.293e-72274Glycine maxGmaAffx.77005.1.S1_atAW509412--1e-72At3g58610ketol-acid reductoisomeraseC.G.S.X.
0.487e-77287Hordeum vulgareContig1643_s_atContig1643--2e-76At3g58610ketol-acid reductoisomeraseC.G.S.X.
0.546e-59230Oryza sativaOs01g0652600BE228987-Ketol-acid reductoisomerase, chloroplast precursor(EC 1.1.1.86) (Acetohydroxy-acid reductoisomerase)(Alpha-keto-beta-hydroxylacil reductoisomerase)6e-5At3g58610ketol-acid reductoisomeraseC.G.S.X.
0.551e-139498Populus trichocarpaPtpAffx.14371.1.S1_atCV261358hypothetical protein-1e-139At3g58610ketol-acid reductoisomeraseC.G.S.X.
0.414e-74280Triticum aestivumTa.27542.1.S1_atCA605463--4e-74At3g58610ketol-acid reductoisomeraseC.G.S.X.
0.293e-109395Vitis vinifera1615699_s_atCD800812hypothetical protein LOC100262542-1e-108At3g58610ketol-acid reductoisomeraseC.G.S.X.
0.459e-67254Zea maysZm.2302.1.A1_atCF626423hypothetical protein LOC100193695-2e-66At3g58610ketol-acid reductoisomeraseC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0046686A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.
CGO:0009082The chemical reactions and pathways resulting in the formation of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00009Link to KaPPA-View 4Leucine, valine, isoleucine and alanine biosynthesis



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00290Link to KEGG PATHWAYValine, leucine and isoleucine biosynthesis
00770Link to KEGG PATHWAYPantothenate and CoA biosynthesis
01065Link to KEGG PATHWAYBiosynthesis of alkaloids derived from histidine and purine
01100Link to KEGG PATHWAYMetabolic pathways
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