Gene omics information

Query gene ID At3g58200
Gene name meprin and TRAF homology domain-containing protein / MATH domain-containing protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5773.8At3g58200824989meprin and TRAF homology domain-containing protein / MATH domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFS.X.H.G.
0.5267.4At3g14630820691CYP72A9putative cytochrome P450S.X.H.G.
0.4659.8At1g11170837658unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBS.X.H.G.
0.4457.2At2g05910815143unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBS.X.H.G.
0.4457.2At3g44460823571DPBF2basic leucine zipper transcription factor (BZIP67), identical to basic leucine zipper transcription factor GI:18656053 from (Arabidopsis thaliana); identical to cDNA basic leucine zipper transcription factor (atbzip67 gene) GI:18656052. Located in the nucleus and expressed during seed maturation in the cotyledons.S.X.H.G.
0.4355.3At4g16620827363integral membrane family protein / nodulin MtN21-relatedF:molecular_function unknown;P:unknown;C:membrane;PBOFAMS.X.H.G.
0.3846.7At3g47950823950AHA4mutant has Slight reduction in root and shoot growth; Exaggerated defects in salt stress; Plasma Membrane H+ ATPaseS.X.H.G.
0.3235.7At1g68380843167unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.2930.3At5g64190836540unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.2726.2At5g09640830823SCPL19encodes a serine carboxypeptidase-like (SCPL) protein. Mutants accumulate sinapoylglucose instead of sinapoylcholine, and have increased levels of choline and decreased activity of the enzyme sinapoylglucose:choline sinapoyltransferase.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
151.499.9GSM10456WT Post-Mature Green Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
124.399.9GSM10454WT Post-Mature Green Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
120.299.9GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
114.099.9GSM131699ATGE_81_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
102.699.9GSM131698ATGE_81_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
101.399.9GSM131697ATGE_81_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
100.499.9GSM131696ATGE_79_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
99.699.9GSM131695ATGE_79_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
97.199.9GSM133117RIKEN-YAMAUCHI1AGSE5687AtGenExpress: Different temperature treatment of seeds
91.499.9GSM131694ATGE_79_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.221e-23111At3g58430825012-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMBFAVC.G.S.X.
0.212e-22107At3g58410825010meprin and TRAF homology domain-containing protein / MATH domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFMC.G.S.X.
0.402e-1583At3g44790823610meprin and TRAF homology domain-containing protein / MATH domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOBFAC.G.S.X.
0.329e-1581At3g58210824990meprin and TRAF homology domain-containing protein / MATH domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOBAC.G.S.X.
0.041e-1377At3g58440825013meprin and TRAF homology domain-containing protein / MATH domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFBVAC.G.S.X.
0.145e-1375At3g58380825007meprin and TRAF homology domain-containing protein / MATH domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.209e-1271At3g44805823614-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.173e-1169At1g31380840028-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e-240Glycine maxHgAffx.16012.1.S1_atCB299839--9e-1At1g44010unknown proteinC.G.S.X.
0.024e+032Hordeum vulgareContig877_x_atContig877--2e-20At5g59970histone H4C.G.S.X.
0.026e-240Oryza sativaOs.47462.1.A1_at---0C.G.S.X.
0.032e-138Populus trichocarpaPtpAffx.27960.1.S1_atCV240521hypothetical protein-9e-2At1g70780unknown proteinC.G.S.X.
0.031e-138Triticum aestivumTaAffx.4463.1.S1_atCA740979--1e-3At5g65390AGP7C.G.S.X.
0.036e-134Vitis vinifera1609296_atCB968957--4e+0At4g18593dual specificity protein phosphatase-relatedC.G.S.X.
0.038e-134Zea maysZm.7867.2.S1_a_atBM080222hypothetical protein LOC100192493-1e+0At2g45650AGL6 (AGAMOUS-LIKE 6)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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