CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g57680

Gene name peptidase S41 family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.46 59.8 At3g57680 824937 peptidase S41 family protein F:serine-type peptidase activity, protein binding;P:proteolysis, intracellular signaling cascade;C:chloroplast thylakoid lumen, membrane;OBPM S.X. H.G.
1.00 100.0 At3g13672 820573 seven in absentia (SINA) family protein F:molecular_function unknown;P:multicellular organismal development, ubiquitin-dependent protein catabolic process;C:nucleus;MPO S.X. H.G.
0.89 94.6 At1g57590 842135 carboxylesterase F:carboxylesterase activity;P:biological_process unknown;C:unknown;PMOB S.X. H.G.
0.67 81.6 At2g25625 817103 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P S.X. H.G.
0.59 74.7 At2g41190 818718 amino acid transporter family protein F:amino acid transmembrane transporter activity;P:amino acid transport;C:plasma membrane, membrane;MPOFBAV S.X. H.G.
0.57 73.8 At1g07430 837255 protein phosphatase 2C, putative / PP2C, putative F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOFBV S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
458.2 100.0 GSM269821 WT leaf-drought-rep2 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
434.2 100.0 GSM269823 T6 leaf-drought-rep2 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
283.2 100.0 GSM269819 C2 leaf-drought-rep1 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
245.8 100.0 GSM269827 C2 leaf-drought-rep2 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
230.9 100.0 GSM269813 WT leaf-drought-rep1 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
166.7 100.0 GSM269829 WT leaf-drought-rep3 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
151.3 99.9 GSM269817 T8 leaf-drought-rep1 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
119.5 99.9 E-ATMX-32-raw-cel-1562974681
117.5 99.9 GSM269825 T8 leaf-drought-rep2 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
89.9 99.9 E-ATMX-32-raw-cel-1562974595
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.01 2e-1 38 At5g35770 833556 SAP (STERILE APETALA) A recessive mutation in the Arabidopsis STERILE APETALA (SAP) causes severe aberrations in inflorescence and flower and ovule development. C.G. S.X.
0.01 8e-1 36 At2g19130 816430 S-locus lectin protein kinase family protein F:protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVA C.G. S.X.
0.01 3e+0 34 At5g40550 834053 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO C.G. S.X.
0.01 3e+0 34 At3g43790 823490 ZIFL2 (ZINC INDUCED FACILITATOR-like 2) F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:response to nematode;C:membrane;BFOMAP C.G. S.X.
0.01 3e+0 34 At3g57790 824949 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein F:polygalacturonase activity;P:carbohydrate metabolic process;C:plasma membrane;PBFOMAV C.G. S.X.
0.01 3e+0 34 At3g14460 820669 disease resistance protein (NBS-LRR class), putative F:protein binding, ATP binding;P:defense response, apoptosis;C:unknown;PMBOFAV C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.21 8e-14 79 Glycine max GmaAffx.74131.1.S1_at AW597568 - - 2e-14 At3g57680 peptidase S41 family protein C.G. S.X.
0.10 1e-10 67 Hordeum vulgare Contig5818_at Contig5818 - - 2e-10 At3g57680 peptidase S41 family protein C.G. S.X.
0.05 2e-18 95 Oryza sativa Os06g0318600 AK069141.1 - Peptidase S41A, C-terminal protease family protein 1e-18 At3g57680 peptidase S41 family protein C.G. S.X.
0.04 2e-5 52 Populus trichocarpa PtpAffx.31752.1.S1_at CV264432 hypothetical protein - 6e-6 At3g57680 peptidase S41 family protein C.G. S.X.
0.03 2e-10 67 Triticum aestivum Ta.10909.1.S1_x_at CD883155 - - 2e-10 At3g57680 peptidase S41 family protein C.G. S.X.
0.21 1e-12 73 Vitis vinifera 1622622_a_at CA808699 similar to peptidase S41 family protein - 2e-12 At3g57680 peptidase S41 family protein C.G. S.X.
0.02 3e-1 36 Zea mays Zm.2853.1.A1_at AY106605.1 hypothetical protein LOC100274141 - 1e-3 At4g29080 PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0007242 A series of reactions within the cell that occur as a result of a single trigger reaction or compound.
L GO:0006508 The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with the hydrolysis of peptide bonds.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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