CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g57530

Gene name CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.33 38.1 At3g57530 824920 CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32) Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitro S.X. H.G.
0.67 81.6 At2g39650 818548 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO S.X. H.G.
0.57 73.8 At3g55980 824764 SZF1 (SALT-INDUCIBLE ZINC FINGER 1) F:transcription factor activity;P:response to chitin, regulation of transcription;C:cellular_component unknown;MOPBFAV S.X. H.G.
0.57 73.8 At4g24570 828559 mitochondrial substrate carrier family protein F:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPO S.X. H.G.
0.50 65.3 At4g27280 828836 calcium-binding EF hand family protein F:calcium ion binding;P:biological_process unknown;C:unknown;MPOF S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
90.6 99.9 E-MEXP-807-raw-cel-1173273116
87.4 99.9 E-MEXP-807-raw-cel-1173273088
76.0 99.9 E-MEXP-807-raw-cel-1173273223
75.6 99.9 E-MEXP-807-raw-cel-1173273060
64.1 99.8 GSM13784 Cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition
57.8 99.8 GSM13779 Dexamethasone plus cycloheximide GSE911 Identification of LEAFY targets during reproductive transition
54.1 99.8 GSM13783 Dexamethasone plus cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition
47.1 99.8 GSM13780 Cycloheximide GSE911 Identification of LEAFY targets during reproductive transition
45.9 99.8 E-MEXP-807-raw-cel-1173273196
44.7 99.8 E-MEXP-1443-raw-cel-1581869632
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.75 0 805 At2g41860 818786 CPK14 member of Calcium Dependent Protein Kinase C.G. S.X.
0.28 6e-51 202 At5g12480 831123 CPK7 (calmodulin-domain protein kinase 7) calmodulin-domain protein kinase CDPK isoform 7 (CPK7) C.G. S.X.
0.31 1e-42 174 At3g51850 824348 CPK13 member of Calcium Dependent Protein Kinase C.G. S.X.
0.35 5e-33 143 At5g19450 832065 CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19) calcium-dependent protein kinase (CDPK19) mRNA, complete C.G. S.X.
0.24 3e-25 117 At1g74740 843813 CPK30 (CALCIUM-DEPENDENT PROTEIN KINASE 30) member of Calcium Dependent Protein Kinase C.G. S.X.
0.12 4e-21 103 At3g20410 821586 CPK9 (calmodulin-domain protein kinase 9) calmodulin-domain protein kinase CDPK isoform 9 (CPK9) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 1e-12 75 Glycine max Gma.3877.1.S1_at BU548211 - - 1e-10 At5g19450 CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19) C.G. S.X.
0.25 1e-47 190 Hordeum vulgare Contig7135_at Contig7135 - - 4e-31 At2g41860 CPK14 C.G. S.X.
0.19 1e-41 173 Oryza sativa Os07g0568600 AK068315.1 - Calcium-dependent protein kinase 4e-25 At2g41860 CPK14 C.G. S.X.
0.47 1e-34 149 Populus trichocarpa PtpAffx.200820.1.S1_x_at pmrna1604 calcium dependent protein kinase 14 - 5e-116 At5g12480 CPK7 (calmodulin-domain protein kinase 7) C.G. S.X.
0.21 6e-17 89 Triticum aestivum Ta.4580.2.S1_a_at BJ268280 calcium-dependent protein kinase - 8e-14 At5g12480 CPK7 (calmodulin-domain protein kinase 7) C.G. S.X.
0.07 4e-12 71 Vitis vinifera 1618615_s_at CF211026 - - 6e-104 At3g51850 CPK13 C.G. S.X.
0.14 1e-16 87 Zea mays Zm.15283.1.A1_at CO532462 calcium-dependent protein kinase, isoform AK1 - 2e-16 At3g57530 CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0009651 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
X GO:0009738 A series of molecular signals mediated by the detection of abscisic acid.
C GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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