Gene omics information

Query gene ID At3g56370
Gene name leucine-rich repeat transmembrane protein kinase, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4659.8At3g56370824804leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.9195.6At5g43020834317leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
0.8391.4At4g14200827060unknown proteinF:unknown;P:biological_process unknown;C:unknown;MBOFPAS.X.H.G.
0.6176.7At4g29360829057glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, anchored to membrane;PFOBS.X.H.G.
0.5570.6At3g57830824952leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
0.4761.2At4g38660830022thaumatin, putativeF:molecular_function unknown;P:response to other organism;C:anchored to membrane;PFMBOVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
20.199.6E-TABM-19-raw-cel-489757236
20.199.6GSM133944Weigel_2-36_CHIP-214_D_Rep3_ATH1GSE5746FRI FLC combos
18.099.5E-TABM-19-raw-cel-489757149
18.099.5GSM133942Weigel_2-34_CHIP-214-A_Rep1_ATH1GSE5746FRI FLC combos
17.699.5GSM131664ATGE_46_AGSE5633AtGenExpress: Developmental series (shoots and stems)
17.099.5GSM318624Apex_octa_18DAS_1GSE12691Knockdown and overexpression of CIN-TCP genes
15.799.5E-TABM-19-raw-cel-489757488
15.799.5GSM133930Weigel_2-22_CHIP-210-A_Rep1_ATH1GSE5746FRI FLC combos
15.699.5GSM131662ATGE_29_B2GSE5633AtGenExpress: Developmental series (shoots and stems)
15.499.5E-TABM-19-raw-cel-489757107
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.026e-654At3g28040822428leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.012e-242At1g35710840475leucine-rich repeat transmembrane protein kinase, putativeF:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.019e-240At5g67330836868ATNRAMP4Encodes a member of the Nramp2 metal transporter family; like its homolog Atnramp3, localized in vacuolar membrane. Seedlings of double mutant, atnramp3-1 atnramp4-1, were arrested at early germination.C.G.S.X.
0.024e-138At4g11490826754protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.014e-138At4g38830830038protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.014e-138At2g15080815997AtRLP19 (Receptor Like Protein 19)F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAVC.G.S.X.
0.011e+036Atcg00670--Encodes the only ClpP (caseinolytic protease) encoded within the plastid genome. Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). Part of the 350 kDa chloroplast Clp complex. The name reflects nomenclature described in Adam et. al (2001).C.G.S.X.
0.011e+036At5g05680830452nuclear pore complex protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.111e-20103Glycine maxGmaAffx.83668.1.S1_atAW780837--3e-21At3g56370leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.085e-1169Hordeum vulgareContig18085_atContig18085--4e-11At3g56370leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.048e-448Oryza sativaOs03g0335500AK119808.1-Protein kinase domain containing protein5e-4At3g56370leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.237e-22107Populus trichocarpaPtpAffx.212302.1.S1_x_atpmrna24124hypothetical protein-5e-22At3g56370leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.061e-1069Triticum aestivumTa.9701.1.S1_atCD897812--3e-11At3g56370leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.033e-859Vitis vinifera1616710_atCF515503hypothetical protein LOC100248331-2e-8At3g56370leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.036e-136Zea maysZm.6241.1.A1_atBQ487255hypothetical protein LOC100274594-3e-1At3g56370leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006468The process of introducing a phosphate group on to a protein.
CGO:0007169The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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