Gene omics information

Query gene ID At3g56200
Gene name amino acid transporter family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2726.2At3g56200824786amino acid transporter family proteinEncodes a putative amino acid transporter.S.X.H.G.
0.2522.6At2g27500817295glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, nucleus, cytoplasm;PFOS.X.H.G.
0.1811.4At5g67300836865MYBR1 (MYB DOMAIN PROTEIN R1)Member of the R2R3 factor MYB gene family involved in mediating plant responses to a variety of abiotic stimiuli.S.X.H.G.
0.1710.2At4g14680827118APS3ATP sulfurylaseS.X.H.G.
0.051.1At5g13190831158-F:unknown;P:biological_process unknown;C:cellular_component unknown;PMS.X.H.G.
0.030.6At4g22690828365CYP706A1member of CYP706AS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
52.599.8GSM133029BC482-1GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
42.799.8E-MEXP-98-raw-cel-320189024
42.499.8GSM133030BC482-2GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
39.699.8GSM133733Buchanan-Wollaston_A-5-bwoll-NG1_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
36.099.7E-MEXP-449-raw-cel-676423253
34.599.7E-MEXP-98-raw-cel-320188859
34.299.7GSM133734Buchanan-Wollaston_A-6-bwoll-NG2_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
31.499.7E-MEXP-98-raw-cel-320188804
29.399.7E-MEXP-98-raw-cel-320189079
26.199.7GSM131508ATGE_12_BGSE5630AtGenExpress: Developmental series (leaves)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.602e-84313At2g40420818635amino acid transporter family proteinEncodes a putative amino acid transporter.C.G.S.X.
0.022e-138At1g48500841271JAZ4 (JASMONATE-ZIM-DOMAIN PROTEIN 4)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
0.016e-136At5g19540832074unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;POBC.G.S.X.
0.026e-136At3g55560824721AGF2 (AT-hook protein of GA feedback 2)F:unknown;P:biological_process unknown;C:chloroplast;PMBOFC.G.S.X.
0.013e+034At5g56960835798basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:response to chitin, regulation of transcription;C:nucleus;PMFOC.G.S.X.
0.023e+034At5g51650835239unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBC.G.S.X.
0.013e+034At5g41460834147fringe-related proteinF:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:unknown;MPFOC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.064e-654Glycine maxGma.6736.1.S1_atBM270793--3e-6At2g40420amino acid transporter family proteinC.G.S.X.
0.021e+034Hordeum vulgareContig20333_atContig20333--4e-1At2g42180unknown proteinC.G.S.X.
0.021e-346Oryza sativaOs02g0727100AK069154.1-Amino acid/polyamine transporter II family protein2e-5At3g30390amino acid transporter family proteinC.G.S.X.
0.142e-757Populus trichocarpaPtpAffx.209240.1.S1_atpmrna18270amino acid transporter-2e-7At3g56200amino acid transporter family proteinC.G.S.X.
0.037e-446Triticum aestivumTaAffx.138055.1.S1_atCA615093--1e-2At3g30390amino acid transporter family proteinC.G.S.X.
0.023e+032Vitis vinifera1608784_atCF518269hypothetical protein LOC100243287-2e-13At3g56210bindingC.G.S.X.
0.023e-136Zea maysZm.1264.1.S1_atCD963414hypothetical protein LOC100278564-3e+0At5g59060unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006865The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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