Gene omics information

Query gene ID At3g55870
Gene name anthranilate synthase, alpha subunit, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.9195.6At3g55870824753anthranilate synthase, alpha subunit, putativeF:oxo-acid-lyase activity, anthranilate synthase activity;P:tryptophan biosynthetic process, biosynthetic process;C:endomembrane system;BOFAPMS.X.H.G.
0.9195.6At1g61680842465TPS14 (TERPENE SYNTHASE 14)F:S-linalool synthase activity;P:monoterpene biosynthetic process;C:plastid;POS.X.H.G.
0.9195.6At2g24210816955TPS10 (terpene synthase 10)F:myrcene synthase activity, (E)-beta-ocimene synthase activity;P:response to jasmonic acid stimulus, monoterpenoid biosynthetic process, response to wounding;C:unknown;POS.X.H.G.
0.9195.6At3g01530821113AtMYB57 (myb domain protein 57)Member of the R2R3 factor gene family.S.X.H.G.
0.8391.4At1g66120842926acyl-activating enzyme 11 (AAE11)F:catalytic activity;P:metabolic process;C:unknown;BOMFPAVS.X.H.G.
0.8089.8At2g45580819166CYP76C3member of CYP76CS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
787.1100.0GSM131609ATGE_43_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
778.6100.0GSM131611ATGE_43_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
680.0100.0GSM131608ATGE_42_DGSE5632AtGenExpress: Developmental series (flowers and pollen)
561.6100.0GSM131606ATGE_42_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
554.5100.0GSM131610ATGE_43_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
354.9100.0GSM131607ATGE_42_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
194.6100.0E-MEXP-285-raw-cel-440783335
111.499.9E-MEXP-285-raw-cel-440783273
95.399.9GSM67086Arabidopsis_Stigma02GSE3056Arabidopsis Pollination Study
77.899.9GSM67087Arabidopsis_Stigma03GSE3056Arabidopsis Pollination Study
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.392e-29131At5g05730830457ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1)ASA1 encodes the alpha subunit of anthranilate synthase, which catalyzes the rate-limiting step of tryptophan synthesis. ASA1 is induced by ethylene, and forms a link between ethylene signalling and auxin synthesis in roots.C.G.S.X.
0.172e-757At2g29690817519ASA2 (ANTHRANILATE SYNTHASE 2)Encode a functional anthranilate synthase protein. Expressed at a constitutive basal level. Expression was not induced by wounding nor bacterial pathogen infiltration. Involved in aromatic amino acid biosynthesis.C.G.S.X.
0.017e-136At4g24190828520SHD (SHEPHERD)encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues.C.G.S.X.
0.027e-136At4g03060828102AOP2 (ALKENYL HYDROXALKYL PRODUCING 2)Encodes a truncated and null function protein, due to a 5-bp deletion in cDNA. The functional allele in ecotype Cvi, AOP2, encodes a 2-oxoglutarate-dependent dioxygenase which is involved in glucosinolate biosynthesis. The natural variation in this locus explains the diversification of alkenyl glucosinolate among different ecotypes of Arabidopsis.C.G.S.X.
0.027e-136At3g43570823453GDSL-motif lipase, putativeF:hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMC.G.S.X.
0.027e-136At1g58725842223GDSL-motif lipase, putativeF:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:cellular_component unknown;PBOMC.G.S.X.
0.017e-136At1g57870842162ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42)F:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:response to salt stress, hyperosmotic response;C:cytosol;MOPFBVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.201e-1585Glycine maxGma.13056.1.S1_atBG651726--2e-8At2g29690ASA2 (ANTHRANILATE SYNTHASE 2)C.G.S.X.
0.116e-961Hordeum vulgareContig11179_atContig11179--5e-8At5g05730ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1)C.G.S.X.
0.203e-1481Oryza sativaOs03g0264400AK069180.1-Anthranilate synthase alpha 2 subunit4e-16At2g29690ASA2 (ANTHRANILATE SYNTHASE 2)C.G.S.X.
0.362e-29131Populus trichocarpaPtpAffx.209285.1.S1_atpmrna18350anthranilate synthase, alpha subunit 1-4e-21At5g05730ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1)C.G.S.X.
0.131e-861Triticum aestivumTa.4287.1.S1_atBQ161159--2e-8At3g55870anthranilate synthase, alpha subunit, putativeC.G.S.X.
0.022e-136Vitis vinifera1610303_atBQ794090--6e-1At1g43320unknown proteinC.G.S.X.
0.196e-1271Zea maysZm.17224.1.S1_s_atBM500725--2e-11At3g55870anthranilate synthase, alpha subunit, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0000162The chemical reactions and pathways resulting in the formation of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid; tryptophan is synthesized from chorismate via anthranilate.
LGO:0009058The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00017Link to KaPPA-View 4Aromatic amino acid biosynthesis



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00400Link to KEGG PATHWAYPhenylalanine, tyrosine and tryptophan biosynthesis
01061Link to KEGG PATHWAYBiosynthesis of phenylpropanoids
01063Link to KEGG PATHWAYBiosynthesis of alkaloids derived from shikimate pathway
01070Link to KEGG PATHWAYBiosynthesis of plant hormones
01100Link to KEGG PATHWAYMetabolic pathways
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