Gene omics information

Query gene ID At3g55130
Gene name ATWBC19 (White-Brown Complex homolog 19)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g55130824679ATWBC19 (White-Brown Complex homolog 19)Encodes a vacuole localized protein of the ABC transporter White-Brown Complex (WBC) family. When overexpressed in planta, confers resistance to kanamycin.S.X.H.G.
0.6478.9At3g58010824970unknown proteinF:unknown;P:biological_process unknown;C:thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast, plastoglobule;PFOS.X.H.G.
0.5873.8At5g13720831217-F:unknown;P:unknown;C:chloroplast, chloroplast inner membrane, chloroplast envelope;BOPAS.X.H.G.
0.5773.8At4g25650828670ACD1-LIKE (ACD1-LIKE)Similar to ACD1. Leaves of antisense ACD1-like plants turn yellow in darkness like wild-type whereas antisense ACD1 plants remain dark after five days of dark treatment.S.X.H.G.
0.5673.0At1g21640838766NADK2Encodes a protein with NAD kinase activity. The protein was also shown to bind calmodulin.S.X.H.G.
0.5673.0At4g29070829028-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5570.6At5g49940835057NFU2 (NIFU-LIKE PROTEIN 2)Encodes a protein containing the NFU domain and functions as a molecular scaffold for iron-sulfur cluster assembly and delivery. Homologous to the cyanobacterial CNFU protein and is targeted to the chloroplast.S.X.H.G.
0.5570.6At1g49970841420CLPR1Encodes a ClpP-related sequence. Though similar to ClpP proteins, this does not contains the highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).S.X.H.G.
0.5570.6At2g01620814691MEE11 (maternal effect embryo arrest 11)F:unknown;P:embryonic development ending in seed dormancy;C:unknown;MPOS.X.H.G.
0.5469.5At3g26085822206CAAX amino terminal protease family proteinF:molecular_function unknown;P:proteolysis;C:membrane;BOPAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
68.199.9GSM131610ATGE_43_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
57.299.8GSM131609ATGE_43_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
52.499.8GSM131606ATGE_42_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
46.399.8GSM131607ATGE_42_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
43.699.8GSM131608ATGE_42_DGSE5632AtGenExpress: Developmental series (flowers and pollen)
38.599.8GSM131611ATGE_43_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
30.399.7E-MEXP-1443-raw-cel-1581869515
28.599.7GSM317519Apex_5DAS_1GSE12676Arabidopsis thaliana Ler developmental series
27.399.7GSM134385St.Clair_1-46_293_Est_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5754Expression Level Polymorphism Project (ELP) - Est
24.799.6GSM134422St.Clair_1-119_378_Van-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5756Expression Level Polymorphism Project (ELP) - Van-0
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.700801At3g55110824677ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMAFPVC.G.S.X.
0.165e-52206At5g13580831202ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:response to nematode;C:membrane;BOMAFPVC.G.S.X.
0.214e-34147At2g39350818520ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:response to nematode;C:plasma membrane;BOMAFPVC.G.S.X.
0.316e-27123At3g55100824676ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMAFPVC.G.S.X.
0.114e-25117At3g55090824675ATPase, coupled to transmembrane movement of substancesF:ATPase activity, coupled to transmembrane movement of substances;P:response to cyclopentenone;C:membrane;BOMAFPVC.G.S.X.
0.021e-656At3g53510824519ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMAFPVC.G.S.X.
0.041e-656At2g37360818312ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMAFPVC.G.S.X.
0.017e-240At1g05420837043OFP12 (OVATE FAMILY PROTEIN 12)F:unknown;P:biological_process unknown;C:unknown;PMC.G.S.X.
0.013e-138At3g25620822149ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:unknown;C:chloroplast;BOMFAPVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+036Glycine maxGma.5876.1.A1_atBQ610057Endonuclease (EN1)-3e+0At4g15950NRPD4C.G.S.X.
0.018e+032Hordeum vulgareContig420_s_atContig420--1e-12At1g3624060S ribosomal protein L30 (RPL30A)C.G.S.X.
0.052e-346Oryza sativaOs03g0281900AK072135.1-ABC transporter related domain containing protein3e-1At3g53510ABC transporter family proteinC.G.S.X.
0.131e-759Populus trichocarpaPtpAffx.209366.1.S1_atpmrna18547white-brown-complex ABC transporter family-1e-18At2g39350ABC transporter family proteinC.G.S.X.
0.015e+034Triticum aestivumTa.25857.1.A1_atCD453562--9e-5At1g42680myosin-relatedC.G.S.X.
0.015e+032Vitis vinifera1619721_atCB343549hypothetical protein LOC100245970-2e+0At1g7775030S ribosomal protein S13, chloroplast, putativeC.G.S.X.
0.012e+034Zea maysZm.5718.1.A1_atBM336876hypothetical protein LOC100278767-6e+0At5g66005Expressed proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0007034The directed movement of substances into, out of or within a vacuole.
SGO:0042891The directed movement of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms, into, out of, within or between cells.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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