Gene omics information

Query gene ID At3g54930
Gene name serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6277.3At3g54930824658serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putativeF:protein phosphatase type 2A regulator activity;P:signal transduction;C:chloroplast, protein phosphatase type 2A complex;MPOFS.X.H.G.
0.7184.2At5g15470831400GAUT14 (Galacturonosyltransferase 14)Encodes a protein with putative galacturonosyltransferase activity.S.X.H.G.
0.6781.6At3g01040821312GAUT13 (Galacturonosyltransferase 13)Encodes a protein with putative galacturonosyltransferase activity.S.X.H.G.
0.6781.6At5g04460830324protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MOPFBVS.X.H.G.
0.6478.9At3g54690824634sugar isomerase (SIS) domain-containing protein / CBS domain-containing proteinF:isomerase activity, sugar binding;P:carbohydrate metabolic process;C:unknown;BOAFPMVS.X.H.G.
0.6478.9At3g55050824671serine/threonine protein phosphatase 2C (PP2C6)F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;PMOFBS.X.H.G.
0.6176.7At1g22200838825unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endoplasmic reticulum;MOFPS.X.H.G.
0.6176.7At3g47080823861bindingF:binding;P:unknown;C:unknown;PBOAMS.X.H.G.
0.5974.7At1g54920841930unknown proteinF:molecular_function unknown;P:biological_process unknown;C:membrane;MOPFBS.X.H.G.
0.5873.8At3g07880819979Rho GDP-dissociation inhibitor family proteinF:Rho GDP-dissociation inhibitor activity;P:biological_process unknown;C:cytoplasm;MFPOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
138.299.9GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
125.199.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
108.599.9GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
103.199.9GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
101.799.9GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
97.299.9GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
94.799.9GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
90.299.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
83.499.9GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
81.999.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.121e-1481At3g09880820146ATB' BETAEncodes B' regulatory subunit of PP2A (AtB'beta).C.G.S.X.
0.192e-1377At5g03470831828ATB' ALPHAEncodes B' regulatory subunit of PP2A (AtB'alpha), putative size of 57 kDa.C.G.S.X.
0.038e-756At1g13460837906serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putativeF:protein phosphatase type 2A regulator activity;P:signal transduction;C:chloroplast, protein phosphatase type 2A complex;MPOFC.G.S.X.
0.078e-446At3g26030822200ATB' DELTAprotein phosphatase 2A regulatory subunit isoform B' deltaC.G.S.X.
0.043e-344At5g25510832626serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putativeF:protein phosphatase type 2A regulator activity;P:signal transduction;C:chloroplast, protein phosphatase type 2A complex;MPOFC.G.S.X.
0.065e-240At3g26020822199serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putativeF:protein phosphatase type 2A regulator activity;P:signal transduction;C:protein phosphatase type 2A complex;MOPFBC.G.S.X.
0.042e-138At4g15415827211ATB' GAMMAB' regulatory subunit of PP2A (AtB'gamma)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.087e-859Glycine maxGmaAffx.46220.1.S1_atBU765282--1e-29At5g03470ATB' ALPHAC.G.S.X.
0.051e-344Hordeum vulgareContig10916_atContig10916--8e-16At4g15415ATB' GAMMAC.G.S.X.
0.053e-552Oryza sativaOs08g0122000AK067159.1-B' regulatory subunit of PP2A6e-12At3g26020serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putativeC.G.S.X.
0.168e-1789Populus trichocarpaPtpAffx.213538.1.S1_x_atpmrna26462hypothetical protein-6e-119At3g09880ATB' BETAC.G.S.X.
0.062e-138Triticum aestivumTa.27783.1.S1_atBQ237765--2e-19At4g15415ATB' GAMMAC.G.S.X.
0.034e-342Vitis vinifera1608166_atCB341683hypothetical protein LOC100253747-2e-2At3g09880ATB' BETAC.G.S.X.
0.052e-240Zea maysZm.19123.1.A1_atBM348809--9e-12At3g26020serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0007165The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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