Gene omics information

Query gene ID At3g53420
Gene name PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g53420824510PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A)a member of the plasma membrane intrinsic protein subfamily PIP2. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed specifically in the vascular bundles and protein level increases slightly during leaf devS.X.H.G.
1.00100.0At2g45960819204PIP1B (NAMED PLASMA MEMBRANE INTRINSIC PROTEIN 1B)a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development.S.X.H.G.
0.7586.9At3g61430825316PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A)a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development.S.X.H.G.
0.5570.6At3g26520822259TIP2 (TONOPLAST INTRINSIC PROTEIN 2)gamma tonoplast intrinsic protein 2 (TIP2). expressed throughout the plant and transcript level is increased upon NaCl or ABA treatments. NaCl stress-sensitive yeast mutant strains exhibit more resistance to salt when expressing this protein.S.X.H.G.
0.1811.4At4g25570828662ACYB-2Encodes cytochrome b561.S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.399.3GSM184500Endodermis&Pericycle root cells 2hr continuous KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
11.599.3GSM184497Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
9.999.1GSM184494Endodermis&Pericycle root cells 2hr KCl control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
6.198.5GSM184913Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
5.798.4E-MEXP-715-raw-cel-1121836153
5.798.4GSM266673Arabidopsis, root cells, endodermis and quiescent center, -Fe, replicate 2GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
5.398.3GSM151696Col-0 uninoculated, biological replicate 3GSE6556Expression profiling of A. thaliana wild type Columbia-0 and mutant gh3.5-1D in response to pathogen Pst DC3000(avrRpt2)
5.398.3E-MEXP-715-raw-cel-1121836196
5.398.3GSM184914Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
5.298.2E-MEXP-1112-raw-cel-1590665377
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.802e-151535At2g37170818293PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2)a member of the plasma membrane intrinsic protein subfamily PIP2. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed specifically in the vascular bundles and protein level increases slightly during leaf devC.G.S.X.
0.773e-113408At2g37180818294RD28 (RESPONSIVE TO DESICCATION 28)a member of the plasma membrane intrinsic protein PIP2. functions as aquaporin and is involved in dessication.C.G.S.X.
0.441e-47190At5g60660836187PIP2F:water channel activity;P:transport;C:integral to membrane, membrane;BPMOFAVC.G.S.X.
0.437e-37155At1g01620839235PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C)a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development.C.G.S.X.
0.423e-36153At4g35100829662PIP3 (PLASMA MEMBRANE INTRINSIC PROTEIN 3)a member of the plasma membrane intrinsic protein PIP. functions as aquaporin. Salt-stress-inducible MIPC.G.S.X.
0.391e-32141At2g16850816186PIP2F:water channel activity;P:transport;C:membrane;BPMOFAVC.G.S.X.
0.412e-30133At3g54820824647PIP2F:water channel activity;P:transport;C:integral to membrane, membrane;BPMOFAVC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.418e-25115Glycine maxGma.2495.1.S1_atU27347.1--8e-25At3g53420PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A)C.G.S.X.
0.361e-36153Hordeum vulgareContig1223_atContig1223aquaporin-6e-38At2g37170PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2)C.G.S.X.
0.345e-27123Oryza sativaOs.31191.2.S1_x_at---0C.G.S.X.
0.322e-31137Populus trichocarpaPtpAffx.7681.5.A1_atCV279861--3e-35At1g01620PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C)C.G.S.X.
0.291e-25117Triticum aestivumTa.28728.1.S1_atAF139815.1--2e-23At2g37180RD28 (RESPONSIVE TO DESICCATION 28)C.G.S.X.
0.339e-49192Vitis vinifera1615808_s_atCF211264aquaporin-like-8e-53At2g37170PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2)C.G.S.X.
0.417e-29127Zea maysZm.608.1.S1_atAF326496.1plasma membrane integral protein ZmPIP2-7-9e-21At2g37170PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0006833The directed movement of water (H2O) into, out of, within or between cells.
XGO:0009414A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.
CGO:0006810The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage