Gene omics information

Query gene ID At3g53380
Gene name lectin protein kinase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g53380824506lectin protein kinase family proteinF:carbohydrate binding, kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAS.X.H.G.
1.00100.0At5g14070831256ROXY2Encodes glutaredoxin ROXY2. ROXY2, together with ROXY1 (AT3G02000), controls anther development. roxy1 roxy2 double mutants are sterile and do not produce pollen.S.X.H.G.
0.9496.7At1g64260842731zinc finger protein-relatedF:zinc ion binding;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.8894.0At4g17350827447phosphoinositide bindingF:phosphoinositide binding;P:signal transduction;C:cellular_component unknown;PFOS.X.H.G.
0.8693.1At2g37560818332ORC2 (ORIGIN RECOGNITION COMPLEX SECOND LARGEST SUBUNIT 2)Origin Recognition Complex subunit 2. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts strongly with all ORC subunits.S.X.H.G.
0.8491.9At1g63210842626RNA binding / hydrolase, acting on ester bonds / protein binding / transcription elongation regulatorF:transcription elongation regulator activity, protein binding, hydrolase activity, acting on ester bonds, RNA binding;P:regulation of transcription from RNA polymerase II promoter, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;C:unknown;BMOFPAS.X.H.G.
0.8290.9At1g10330837572pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFS.X.H.G.
0.7184.2At2g28620817411kinesin motor protein-relatedF:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex, chloroplast;MOBFPAVS.X.H.G.
0.5570.6At5g41000834102YSL4 (YELLOW STRIPE LIKE 4)Arabidopsis thaliana metal-nicotianamine transporter YSL4S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4136.0100.0GSM133760Lindsey_1-12_heart-stage-root_Rep3_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
95.199.9GSM133755Lindsey_1-7_heart-stage-cotyledon_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
94.899.9GSM133780Lindsey_1-3_globular-apical_Rep3_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
73.799.9GSM133763Lindsey_1-15_torpedo-cotyledon_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
42.699.8GSM133779Lindsey_1-5_globular-basal_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
39.199.8GSM133778Lindsey_1-2_globular-apical_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
29.399.7GSM133756Lindsey_1-10_heart-stage-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
17.999.5GSM133771Lindsey_1-23_torpedo-apical_Rep5_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
15.499.5GSM184904Arabidopsis, root cells, protophloem, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
12.099.3GSM184923Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.283e-1997At5g03140831590lectin protein kinase family proteinF:carbohydrate binding, kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.012e-242At5g10530830918lectin protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.012e-242At2g45160819124scarecrow transcription factor family proteinF:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PMBOC.G.S.X.
0.017e-240At2g43690818971lectin protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.017e-240At1g04700839437protein kinase family proteinF:protein serine/threonine/tyrosine kinase activity, protein kinase activity;P:protein amino acid phosphorylation;C:cytosol;MPOBFVAC.G.S.X.
0.017e-240At1g56145842067leucine-rich repeat family protein / protein kinase family proteinF:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVAC.G.S.X.
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Orthologous genes



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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.026e-344Glycine maxGma.10967.1.S1_atBQ253089--8e-34At1g09970LRR XI-23C.G.S.X.
0.015e-136Hordeum vulgareContig16878_atContig16878--6e-7At2g37050kinaseC.G.S.X.
0.021e-450Oryza sativaOs04g01360649632.m00403--1e-1At3g17410serine/threonine protein kinase, putativeC.G.S.X.
0.255e-28127Populus trichocarpaPtpAffx.213493.1.S1_atpmrna26378hypothetical protein-3e-28At3g53380lectin protein kinase family proteinC.G.S.X.
0.013e-138Triticum aestivumTaAffx.65986.1.S1_atBJ212881--3e-1At5g06710HAT14 (HOMEOBOX FROM ARABIDOPSIS THALIANA)C.G.S.X.
0.028e-238Vitis vinifera1617287_atAY427196.1--2e-17At5g10530lectin protein kinase, putativeC.G.S.X.
0.015e-136Zea maysZm.8160.1.A1_atBM337443hypothetical protein LOC100274775-2e-2At3g09032unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006468The process of introducing a phosphate group on to a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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