Gene omics information

Query gene ID At3g53250
Gene name auxin-responsive family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2115.8At3g53250824492auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;POS.X.H.G.
0.4050.8At5g02760831234protein phosphatase 2C family protein / PP2C family proteinF:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;PMOFBAVS.X.H.G.
0.4050.8At5g62280836349unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.040.9At2g37030818278auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;POS.X.H.G.
0.020.4At5g01740831686-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
228.3100.0GSM2454912 hr Non-Stress IP RNA Rep 3GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation
129.199.9E-MEXP-1299-raw-cel-1519901784
101.099.9GSM2454712 hr Non-Stress IP RNA Rep 1GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation
98.499.9E-MEXP-1608-raw-cel-1620686981
75.099.9E-MEXP-1304-raw-cel-1530618371
66.099.8E-MEXP-1304-raw-cel-1530619805
64.899.8E-MEXP-1304-raw-cel-1530619183
63.599.8E-MEXP-883-raw-cel-1697709978
62.899.8E-MEXP-1299-raw-cel-1519901856
61.099.8E-MEXP-883-raw-cel-1697709922
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.464e-1167At2g37030818278auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;POC.G.S.X.
0.011e-240At3g11130820284clathrin heavy chain, putativeF:protein binding, structural molecule activity, binding;P:intracellular protein transport, vesicle-mediated transport;C:plasma membrane, vacuole;MOFPBC.G.S.X.
0.012e-136At1g70620843399cyclin-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVAC.G.S.X.
0.026e-134At5g23860832451TUB8beta-tubulin, preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves, stems, and flowers.C.G.S.X.
0.026e-134At5g62700836391TUB3encodes tubulin beta-2/beta-3 chainC.G.S.X.
0.026e-134At5g62690836390TUB2encodes tubulin beta-2/beta-3 chainC.G.S.X.
0.016e-134At5g20710832194BGAL7 (beta-galactosidase 7)F:beta-galactosidase activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:endomembrane system, beta-galactosidase complex;PMBFOAC.G.S.X.
0.036e-134At2g36870818259xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeF:hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity;P:carbohydrate metabolic process, cellular glucan metabolic process;C:endomembrane system, cell wall, apoplast;PFBOAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e+032Glycine maxGmaAffx.75596.1.S1_atAW307212--7e-1At5g42232-C.G.S.X.
0.055e+030Hordeum vulgareHVSMEn0003C09f_atHVSMEn0003C09f--4e-8At3g10860ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putativeC.G.S.X.
0.041e+034Oryza sativaOsAffx.4553.1.S1_at---0C.G.S.X.
0.144e-342Populus trichocarpaPtpAffx.213510.1.S1_atpmrna26410SAUR family protein-3e-11At2g37030auxin-responsive family proteinC.G.S.X.
0.043e+032Triticum aestivumTa.17966.1.S1_atCA626664--2e-1At5g5842040S ribosomal protein S4 (RPS4D)C.G.S.X.
0.047e-132Vitis vinifera1619279_atCF207445--4e+0At3g53250auxin-responsive family proteinC.G.S.X.
0.031e+032Zea maysZm.1960.1.A1_atAW566154palmitoyltransferase swf1-4e-1At3g04970zinc finger (DHHC type) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0009733A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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