Gene omics information

Query gene ID At3g52890
Gene name KIPK (KCBP-interacting protein kinase)
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g52890824455KIPK (KCBP-interacting protein kinase)KCBP-interacting protein kinase interacts specifically with the tail region of KCBPS.X.H.G.
0.5570.6At3g54670824632TTN8 (TITAN8)cohesinS.X.H.G.
0.4963.5At3g03300821300DCL2 (DICER-LIKE 2)Encodes a Dicer-like protein that functions in the antiviral silencing response in turnip-crinkle virus-infected plants but not in TMV or CMV-strain-Y-infected plants. Involved in the production of ta-siRNAs. Partially antagonizes the production of miRNAs by DCL1. Substitutes for DCL4 to produce viral siRNA when DCL4 is missing or inhibited. Able to produce siRNAs but not miRNAs.S.X.H.G.
0.4862.5At5g49880835051mitotic checkpoint family proteinF:unknown;P:mitotic cell cycle checkpoint;C:unknown;MOBFPAVS.X.H.G.
0.4457.2At4g09140826493MLH1 (MUTL-HOMOLOGUE 1)Encodes a protein with similarity to Mut1 DNA mismatch repair protein, from E.coli. The protein is expressed during prophase I of meiosis, colocalizes with MLH3 throughout pachytene and is dependent on MLH3 for proper localization.S.X.H.G.
0.4152.4At1g48410841262AGO1 (ARGONAUTE 1)Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus.S.X.H.G.
0.3846.7At5g165053770617transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.3846.7At4g02680828205EOL1 (ETO1-LIKE 1)Encodes a paralog of ETO1, which is a negative regulator of ACS5 (a key enzyme in ethylene biosynthesis pathway). EOL1 also interacts with and inhibits the activity of ACS5.S.X.H.G.
0.3745.0At2g45700819178sterile alpha motif (SAM) domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBAS.X.H.G.
0.3745.0At5g47750834826D6PKL2 (D6 PROTEIN KINASE LIKE 2)F:kinase activity;P:protein amino acid phosphorylation;C:nucleolus, nucleus, cytoplasm;MOPFBVAS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
37.299.7GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
23.399.6GSM142625MC002_ATH1_A1.3-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
22.399.6GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
20.599.6GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.543e-177623At2g36350818208protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MOPFBVAC.G.S.X.
0.212e-27125At5g03640831770protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:cellular_component unknown;MOPFBVAC.G.S.X.
0.071e-1999At5g47750834826D6PKL2 (D6 PROTEIN KINASE LIKE 2)F:kinase activity;P:protein amino acid phosphorylation;C:nucleolus, nucleus, cytoplasm;MOPFBVAC.G.S.X.
0.032e-1585At2g44830819092protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane, nucleus;MOPFBVAC.G.S.X.
0.093e-1481At5g55910835689D6PK (D6 PROTEIN KINASE)D6PK is a protein kinase involved that plays a role in polar auxin transport. Most likely acts redundantly with the related proteins: D6PKL1,D6PKL2,and D6PKL3. PIN1 is a target of D6PK phosphorylation.C.G.S.X.
0.081e-1379At3g27580822380ATPK7a member of a subfamily of Ser/Thr PKs in plants.C.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.101e-1069Glycine maxGmaAffx.70074.1.S1_atBU926626--4e-12At2g36350protein kinase, putativeC.G.S.X.
0.047e-446Hordeum vulgareContig9773_atContig9773--3e-6At5g55910D6PK (D6 PROTEIN KINASE)C.G.S.X.
0.092e-1379Oryza sativaOs12g0480200AK107126.1-Protein kinase domain containing protein4e-13At5g55910D6PK (D6 PROTEIN KINASE)C.G.S.X.
0.179e-1273Populus trichocarpaPtpAffx.204473.1.S1_s_atpmrna8782hypothetical protein-9e-34At2g36350protein kinase, putativeC.G.S.X.
0.056e-654Triticum aestivumTa.5112.1.A1_atBJ277085--3e-9At5g55910D6PK (D6 PROTEIN KINASE)C.G.S.X.
0.032e-344Vitis vinifera1609974_atCB977877hypothetical protein LOC100267017-2e-61At4g26610D6PKL1 (D6 PROTEIN KINASE LIKE 1)C.G.S.X.
0.063e-1273Zea maysZm.18668.1.A1_atCO519508hypothetical protein LOC100272378-4e-4At1g79250AGC1.7 (AGC KINASE 1.7)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006468The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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