CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g52810

Gene name PAP21 (PURPLE ACID PHOSPHATASE 21)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At3g52810 824447 PAP21 (PURPLE ACID PHOSPHATASE 21) F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:endomembrane system;PBMOFA S.X. H.G.
1.00 100.0 At1g30350 839915 pectate lyase family protein F:lyase activity, pectate lyase activity;P:biological_process unknown;C:endomembrane system;BPFO S.X. H.G.
0.95 97.0 At1g23240 838933 caleosin-related family protein F:lipase activity, calcium ion binding;P:unknown;C:extracellular region;PFO S.X. H.G.
0.95 97.0 At5g07540 830647 GRP16 (GLYCINE-RICH PROTEIN 16) encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stages 11 and 12). S.X. H.G.
0.95 97.0 At5g61605 836282 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.95 97.0 At2g23800 816912 GGPS2 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 2) encodes an endoplasmic reticulum-targeted geranylgeranyl pyrophosphate synthase S.X. H.G.
0.91 95.6 At5g07520 830645 GRP18 (GLYCINE-RICH PROTEIN 18) encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stage 12). S.X. H.G.
0.90 95.1 At1g28430 839741 CYP705A24 member of CYP705A S.X. H.G.
0.83 91.4 At5g07530 830646 GRP17 (GLYCINE RICH PROTEIN 17) encodes a glycine-rich protein that has oleosin domain and is expressed specifically during flower stages 10 to 12. Protein is found on mature pollen coat. S.X. H.G.
0.80 89.8 At1g23590 838969 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
368.2 100.0 GSM106833 opr3_JA_0.5 hr_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
207.8 100.0 GSM106825 opr3_0 hr_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
188.6 100.0 GSM106919 opr3_OPDA_0.5 hr_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
153.3 99.9 GSM106827 opr3_0 hr_Rep2 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
134.4 99.9 GSM106934 opr3_OPDA_8 hrs_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
125.3 99.9 GSM106922 opr3_OPDA_2 hrs_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
123.7 99.9 GSM131591 ATGE_36_A GSE5632 AtGenExpress: Developmental series (flowers and pollen)
111.3 99.9 GSM106921 opr3_OPDA_0.5 hr_Rep3 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
107.6 99.9 GSM131593 ATGE_36_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
105.6 99.9 GSM106908 opr3_JA_0.5 hr_Rep3 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.63 1e-94 347 At3g52820 824448 PAP22 (PURPLE ACID PHOSPHATASE 22) F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:endomembrane system;PBOMFA C.G. S.X.
0.01 7e-1 36 At1g35530 840448 DEAD/DEAH box helicase, putative F:in 6 functions;P:unknown;C:cellular_component unknown;BOMFPAV C.G. S.X.
0.02 7e-1 36 At1g36020 840505 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.01 3e+0 34 At5g10010 830863 unknown protein F:molecular_function unknown;P:biological_process unknown;C:nucleolus;MOFBPVA C.G. S.X.
0.02 3e+0 34 At4g02425 828030 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PM C.G. S.X.
0.01 3e+0 34 At4g19210 827661 ATRLI2 member of RLI subfamily C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e+0 34 Glycine max Gma.4063.1.S1_at BQ473336 - - 4e-3 At3g20500 PAP18 (PURPLE ACID PHOSPHATASE 18) C.G. S.X.
0.06 5e-3 42 Hordeum vulgare Contig8523_s_at Contig8523 - - 9e-13 At3g52820 PAP22 (PURPLE ACID PHOSPHATASE 22) C.G. S.X.
0.05 6e-9 63 Oryza sativa Os11g0151700 AK073222.1 - Purple acid phosphatase 2e-5 At3g52820 PAP22 (PURPLE ACID PHOSPHATASE 22) C.G. S.X.
0.02 4e+0 34 Populus trichocarpa PtpAffx.29166.1.S1_at DN496011 - - 4e+0 At2g19580 TET2 (TETRASPANIN2) C.G. S.X.
0.02 3e-3 44 Triticum aestivum Ta.12436.1.S1_at BQ172333 - - 2e-3 At3g52810 PAP21 (PURPLE ACID PHOSPHATASE 21) C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1622084_at CF513595 hypothetical protein LOC100256435 - 1e+0 At5g51451 unknown protein C.G. S.X.
0.02 4e+0 32 Zea mays ZmAffx.1129.1.S1_at AW330590 - - 2e+0 At1g68870 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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