Gene omics information

Query gene ID At3g52690
Gene name -
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5065.3At3g52690824435-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.8089.8At3g19530821489unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5773.8At3g07710819962-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5570.6At2g34370818000pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:unknown;POFMS.X.H.G.
0.2217.5At3g12720820454ATMYB67 (MYB DOMAIN PROTEIN 67)Member of the R2R3 factor gene family.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
854.3100.0GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
524.0100.0GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
409.7100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
378.3100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
267.4100.0GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
259.8100.0GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
233.9100.0GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
233.2100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
176.5100.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
162.599.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.214e-35149At3g55670824733-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.274e-32139At4g00160828180F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.364e-32139At3g52680824434F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.312e-31137At3g52670824433F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
0.326e-22105At3g51530824316F-box family proteinF:molecular_function unknown;P:unknown;C:unknown;PC.G.S.X.
0.242e-1583At3g49020824063F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:nucleus;PMC.G.S.X.
0.163e-1169At4g13965827031-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBFMC.G.S.X.
0.113e-1169At3g26920822308-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e+034Glycine maxGmaAffx.1858.1.S1_atBG511708DNA mismatch repair protein-8e-1At1g07960ATPDIL5-1 (PDI-like 5-1)C.G.S.X.
0.036e-238Hordeum vulgareHVSMEc0015H24f_atHVSMEc0015H24f--1e-86Atcg00430-C.G.S.X.
0.039e-136Oryza sativaOsAffx.10213.1.A1_at---0C.G.S.X.
0.034e-240Populus trichocarpaPtpAffx.29029.1.S1_atDN501771--8e-1At1g10745-C.G.S.X.
0.032e+034Triticum aestivumTa.8765.1.A1_x_atBQ162344--3e+0At3g03405-C.G.S.X.
0.033e-238Vitis vinifera1615163_atCF414631hypothetical protein LOC100248092-5e+0At5g49440unknown proteinC.G.S.X.
0.023e+032Zea maysZmAffx.841.1.A1_atAI770596--1e+1At4g38680GRP2 (GLYCINE RICH PROTEIN 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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