Gene omics information

Query gene ID At3g52370
Gene name FLA15 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 15 PRECURSOR)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.157.8At3g52370824402FLA15 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 15 PRECURSOR)F:unknown;P:cell adhesion;C:endomembrane system;BOMPFAVS.X.H.G.
0.5065.3At5g25810832650tny (TINY)encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family (TINY). The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Ectopic or overexpression of this gene in a Ds tagged line has reduced cell expansion. The expression of this gene is induced by ethylene and light and appears to stimulate cytokinin biosynthesis.S.X.H.G.
0.4050.8At1g13830837944beta-1,3-glucanase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBMOFVAS.X.H.G.
0.4050.8At5g48290834882heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;POBFS.X.H.G.
0.2522.6At5g61340836255unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
74.499.9GSM142754MJ001_ATH1_A5-jones-WT-Rep3GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
69.799.9GSM142750MJ001_ATH1_A1-jones-WT1GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
65.999.8GSM142751MJ001_ATH1_A2-jones-WT2GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
61.699.8GSM184838Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8GSE7639Expression analysis of root developmental zones after treatment with salt
57.799.8GSM184837Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 7GSE7639Expression analysis of root developmental zones after treatment with salt
53.299.8GSM131173AtGen_D-5_1-BL_REP1_ATH1GSE5617AtGenExpress: Light treatments
52.099.8GSM311295Laser capture microdissected (LCM) general seed coat at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
52.099.8GSM131176AtGen_D-8_1-WL_REP1_ATH1GSE5617AtGenExpress: Light treatments
49.799.8GSM142755MJ001_ATH1_A6-jones-RH-Rep3GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
44.999.8E-ATMX-1-raw-cel-1112746209
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.661e-73278At2g35860818159FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR)F:unknown;P:cell adhesion;C:endomembrane system;BMPOFAVC.G.S.X.
0.513e-40167At5g06390830527FLA17 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 17 PRECURSOR)F:molecular_function unknown;P:cell adhesion;C:vacuole;BPOMFAVC.G.S.X.
0.466e-32139At3g11700820342FLA18 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 18 PRECURSOR)F:molecular_function unknown;P:response to cyclopentenone, cell adhesion;C:vacuole;BPOMC.G.S.X.
0.014e-240At1g36990840609unknown proteinF:unknown;P:unknown;C:chloroplast;OMBFPVC.G.S.X.
0.032e-138At5g40730834073AGP24Encodes an arabinogalactan-protein (AGP24).C.G.S.X.
0.022e-138At2g22410816772pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:unknown;POMFBC.G.S.X.
0.022e-138At1g13290837889DOT5 (DEFECTIVELY ORGANIZED TRIBUTARIES 5)Encodes a putative zinc finger protein (C2H2 family, type IIIA, subclass A1d) that has a WIP domain. Seedlings with mutations in DOT5 have a misaligned venation defect in their leaves and cotyledons. Additional developmental abnormalities, such as elongated petioles and aberrant phyllotaxy suggest that DOT5 is required for normal shoot and root development.C.G.S.X.
0.016e-136At5g62390836360ATBAG7 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 7)A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.293e-31137Glycine maxGmaAffx.85883.1.S1_atCA935724--3e-19At5g06390FLA17 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 17 PRECURSOR)C.G.S.X.
0.031e-344Hordeum vulgareContig5827_atContig5827--7e-4At2g35860FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR)C.G.S.X.
0.038e-240Oryza sativaOsAffx.19902.1.S1_at---0C.G.S.X.
0.232e-26121Populus trichocarpaPtpAffx.358.1.S1_atCV239249--2e-26At3g52370FLA15 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 15 PRECURSOR)C.G.S.X.
0.027e-136Triticum aestivumTaAffx.101059.2.S1_atCA630164--1e-3At2g26930ATCDPMEK (4-(CYTIDINE 5'-PHOSPHO)-2-C-METHYL-D-ERITHRITOL KINASE)C.G.S.X.
0.131e-859Vitis vinifera1617165_atCD721075hypothetical protein LOC100254768-9e-24At5g06390FLA17 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 17 PRECURSOR)C.G.S.X.
0.011e+034Zea maysZmAffx.11.1.S1_atU14598.1--5e-1At3g22275unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0007155The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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