Gene omics information

Query gene ID At3g52130
Gene name protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g52130824377protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PS.X.H.G.
1.00100.0At3g07450819933protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PS.X.H.G.
1.00100.0At3g42960823352ATA1 (ARABIDOPSIS TAPETUM 1)Arabidopsis homolog of TASSELSEED2. Expressed specifically in tapetal cells.S.X.H.G.
1.00100.0At4g20420827790tapetum-specific protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
1.00100.0At4g34850829637chalcone and stilbene synthase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:cellular_component unknown;PBOFS.X.H.G.
1.00100.0At4g35420829695dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase familyF:coenzyme binding, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:endomembrane system;BOPFMAVS.X.H.G.
0.9496.7At3g13220820512ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:unknown;C:membrane;BOMAFPVS.X.H.G.
0.9496.7At1g02050839280chalcone and stilbene synthase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:unknown;PBOFS.X.H.G.
0.9496.7At4g14080827044MEE48 (maternal effect embryo arrest 48)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:embryonic development ending in seed dormancy, pollen exine formation;C:endomembrane system;POS.X.H.G.
0.9496.7At1g01280839470CYP703A2 (CYTOCHROME P450, FAMILY 703, SUBFAMILY A, POLYPEPTIDE 2)member of CYP703A CYP703A2 is expressed specifically in anthers of land plants, catalyzing the in-chain hydroxylation at the C-7 position of medium-chain saturated fatty acids (lauric acid in-chain hydroxylase) which is involved in pollen development (sporopollenin synthesis).S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
326.1100.0E-MEXP-1592-raw-cel-1617526952
324.7100.0E-MEXP-1592-raw-cel-1617526984
324.6100.0E-MEXP-1592-raw-cel-1617526888
308.8100.0E-MEXP-1592-raw-cel-1617526856
289.2100.0E-MEXP-1592-raw-cel-1617526920
246.4100.0E-MEXP-1592-raw-cel-1617526816
221.3100.0E-MEXP-1592-raw-cel-1617526824
218.3100.0E-MEXP-1592-raw-cel-1617526848
195.7100.0E-MEXP-1592-raw-cel-1617526976
189.4100.0GSM131578ATGE_31_C2GSE5632AtGenExpress: Developmental series (flowers and pollen)
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Homologous genes



Paralogous genes



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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.021e-240At2g41640818762transferase, transferring glycosyl groupsF:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:unknown;PMOBFC.G.S.X.
0.025e-238At3g09230820079AtMYB1 (myb domain protein 1)member of MYB3R- and R2R3- type MYB- encoding genesC.G.S.X.
0.012e-136At5g48060834858C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFC.G.S.X.
0.017e-134At5g47430834790zinc ion bindingF:zinc ion binding;P:biological_process unknown;C:nucleus;MFOPBVC.G.S.X.
0.027e-134At3g50180824180unknown proteinF:unknown;P:biological_process unknown;C:chloroplast;MPOFBVAC.G.S.X.
0.017e-134At3g46740823827TOC75-III (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 75-III)Component of the translocon outer membrane (TOC) complex. Forms the outer envelope translocation channel (beta-barrel). Plays a role in preprotein conductance. Imported into chloroplast. Expressed in young dividing photosynthetic tissues. Knockout mutants are embryo lethal with arrested development at the two-cell stage. Knockout mutants have abnormal etioplasts.C.G.S.X.
0.017e-134At3g11964820370RNA bindingF:RNA binding;P:mRNA processing, RNA processing;C:nucleolus, plasma membrane;BOMFPAC.G.S.X.
0.037e-134At3g26350822239-F:unknown;P:unknown;C:chloroplast;MPFOVBAC.G.S.X.
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Orthologous genes



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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.063e-136Glycine maxGma.17231.1.A1_atAW309582--1e-1At3g52130protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.043e-134Hordeum vulgareAF146272_s_atAF146272--9e-1At3g52130protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.041e+034Oryza sativaOsAffx.15533.1.S1_at---0C.G.S.X.
0.071e+034Populus trichocarpaPtpAffx.216350.1.S1_atpmrna31067hypothetical protein-4e-1At3g52130protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.057e-134Triticum aestivumTaAffx.80316.1.S1_atCA698387--6e-1At3g52130protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.033e+030Vitis vinifera1615511_atCF404471hypothetical protein LOC100249393-1e+0At5g25210unknown proteinC.G.S.X.
0.041e+032Zea maysZmAffx.977.1.S1_atAI833949--8e-1At4g04630unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006869The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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